Sphingomonas naphthae: PQ455_18020
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Entry
PQ455_18020 CDS
T08850
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00520
Amino sugar and nucleotide sugar metabolism
snap01100
Metabolic pathways
snap01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PQ455_18020
Enzymes [BR:
snap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
PQ455_18020
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
adh_short
KR
NmrA
ODC_AZ
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WCT73478
LinkDB
All DBs
Position
complement(3729262..3730224)
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AA seq
320 aa
AA seq
DB search
MTTKISGSAKRILVTGGAGFIGSHLCERLLEQGNEVLCVDNFFTGRRRNVVKLFDYAGFE
LLRHDVTFPLYAEVDEIYNLACPASPVHYQFDPVQTTKTSVVGAINMLGLAKRLKIPVFQ
ASTSEVYGDPHVHPQTEDYWGNVNPIGPRSCYDEGKRCAETLFFDYYRQHGVKIKVIRIF
NTYGPNMHPADGRVVSNFIVQALKGEDITIYGDGLQTRSFCYVDDLVRGFMAMMAGPDDF
TGPMNLGNPGEFTMMQLAEQVIELTGSKSQIVYRPLPQDDPRQRQPNIDQARERFGWEPE
VPLREGLKKTIAYFDGLLKE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaagatttcgggctcggccaagcgtatcctcgtgaccggcggcgcgggcttc
atcggctcgcatctgtgcgagcgactgctggagcagggcaacgaagtcctgtgcgtggac
aatttcttcaccggccgccgccgcaacgtcgtcaagctgttcgattatgccggcttcgag
ctgctgcgccacgacgtgaccttcccgctctatgcggaggtggacgagatctacaatctc
gcctgcccggcctccccggtccattatcagttcgatccggtgcagacgaccaagaccagc
gtcgtcggcgcgatcaacatgctgggtctggccaagcggctgaagatccccgtgttccag
gcctccacgtccgaagtgtatggcgatccgcacgtccatccgcaaaccgaggattattgg
ggcaacgtcaacccgatcggcccgcgctcctgttatgacgagggcaagcgctgcgccgag
accctgttcttcgattattaccgccagcatggcgtgaagatcaaagtcatccgcatcttc
aacacctatggcccgaacatgcacccggccgacgggcgcgtggtctccaacttcatcgtc
caggcgctgaagggcgaggacatcacgatctatggcgacggcctccagacccgttccttc
tgctacgtcgacgatctggtgcgcggcttcatggcgatgatggccggaccggacgatttc
accggcccgatgaacctgggcaatcccggcgaattcacgatgatgcagttggccgaacag
gtgatcgagctgaccggctccaagtcgcagatcgtctatcgcccgctgccgcaggacgac
ccccgccagcgccagcccaacatcgatcaggcgcgcgaacgcttcggctgggaaccggaa
gtgccgctgcgcgagggcctgaagaagaccatcgcctatttcgacgggctcctgaaggaa
taa
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