KEGG   Sphingomonas naphthae: PQ455_18810
Entry
PQ455_18810       CDS       T08850                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
snap  Sphingomonas naphthae
Pathway
snap02020  Two-component system
snap02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:snap00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PQ455_18810 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PQ455_18810 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snap03021]
    PQ455_18810 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:snap02035]
    PQ455_18810 (fliA)
Transcription machinery [BR:snap03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PQ455_18810 (fliA)
Bacterial motility proteins [BR:snap02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PQ455_18810 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Sigma70_ECF dNK DUF1492
Other DBs
NCBI-ProteinID: WCT73632
UniProt: A0ABY7TLR5
LinkDB
Position
complement(3904674..3905399)
AA seq 241 aa
MALADPQMTYSRNPARPSPEKLARTHMALVRKIAWHVHGRVSSAIDIEDLVQIGMVALVE
AANGYEDRGHAFSTYATMRIRGSMIDHLRRQATLCRSAMARRKELGKATARLEAELGRQP
SESELAQAMGMEPSAFREMVDASTNVRQESLDEVYSDHSMWFADVEDRIDDTIEREQLKQ
ALAATIRTLPEREAMVLQLYFVEEMNLEEIGQTLGVGAARVCQIKKAALDRVRKALKNWD
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcactcgctgatccccagatgacctacagccgcaatcccgcgcgcccgagccccgaa
aagctcgcacggacccacatggcgctcgtccgcaagatcgcgtggcacgtccacggccgg
gtctcctcggcgatcgacatcgaggatctcgtgcagatcgggatggtcgcgctggtcgag
gccgccaacggctacgaggatcgcggccacgctttctcgacctacgccacgatgcggatc
cgcggcagcatgatcgatcacctccggcggcaggcgactttgtgccgatcggcgatggcg
cggcgcaaggaactgggcaaggcgaccgcccggctggaggccgaactcggccgccaaccc
agcgaatccgagctggcgcaggcgatgggcatggaaccctcggccttccgcgaaatggtc
gatgcctcgaccaacgtgcggcaggaatcgctcgacgaagtctattcggatcactcgatg
tggttcgccgatgtcgaggaccggatcgacgacacgatcgagcgcgagcagctgaagcag
gcgctggcggcgacgatccgcaccctgcccgaacgcgaggcgatggtgctgcaactctat
ttcgtcgaggagatgaacctggaagagatcggccagacgctgggcgtgggcgcggcgcgc
gtgtgccagatcaagaaggcggcgctggacagggtgcgcaaggcactgaagaattgggac
gattga

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