Sphingomonas naphthae: PQ455_19010
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Entry
PQ455_19010 CDS
T08850
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snap03021
]
PQ455_19010
Transcription machinery [BR:
snap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PQ455_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
GerE
SPO11_like
Linocin_M18
PMEI
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WCT75632
LinkDB
All DBs
Position
unnamed1:17723..18292
Genome browser
AA seq
189 aa
AA seq
DB search
MSLDWTTLTDGELATLSIAGREAAFAEIMRRHRQSIFRMVRACVGEADEALDLLQETFVA
AHQALPRYDGDRSMRAWLSTIAINKCRDWGRKRTVRRFLAFAAPIGAEAEAIADDQVAID
DATGDRQELDRVTRAIAGLPTALKESLVLRTIEGLSQAETAAVLSISEKAVETRLYRARS
KLLERLGGR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctcgactggaccacgcttacggacggcgagctggcgaccctcagcatcgccggg
cgcgaagccgccttcgccgagatcatgcgccgccatcggcagtcaatcttccgcatggtg
cgcgcgtgcgtcggcgaggccgacgaggcgctggaccttctgcaggagaccttcgtcgcg
gcgcatcaggccctgccccgctacgacggcgatcgatcgatgcgcgcgtggctatcgacg
atcgcgatcaacaagtgccgcgattgggggcgcaagcgcaccgtgcggcgctttctggcg
ttcgccgcaccgatcggcgcggaagccgaagccattgcagacgaccaggtggcgatcgac
gacgcgacgggcgaccgacaggaactcgaccgcgtgacgcgcgccattgcgggcttgccg
accgcattgaaggaatccttggtgctgcgcacgatcgaggggttgagccaggctgaaacc
gcggcagtgttgtcgatcagcgaaaaggcggtagaaacccgcctctatcgcgcgcgatcg
aagttgctggagcgattgggcgggcgctga
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