Sphingomonas naphthae: PQ455_19390
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Entry
PQ455_19390 CDS
T08850
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03030
DNA replication
snap03430
Mismatch repair
snap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ455_19390
03430 Mismatch repair
PQ455_19390
03440 Homologous recombination
PQ455_19390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snap03032
]
PQ455_19390
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_19390
Enzymes [BR:
snap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ455_19390
DNA replication proteins [BR:
snap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ455_19390
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ455_19390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
NOT2_3_5_C
MliC
Motif
Other DBs
NCBI-ProteinID:
WCT75704
UniProt:
A0ABY7TU49
LinkDB
All DBs
Position
unnamed1:complement(90844..91710)
Genome browser
AA seq
288 aa
AA seq
DB search
MAALSPPEQAAALLDEHPDYRVLRALPRPECYPVAQPQGLVRTAVVIDVETMGLEADHPI
IDLAMQRIAFDERGVIIRVGQPRQWFEDPGMPIPAEITRLTGITDADVAGRRIDADAATS
LIASTTLAIAHNAAFDAPRVERRLPDVAGHAWACSCNEVPWPDLGFDGRKLGHLLMQQGL
FHQGHRAAVDVWATINLLGRVMPDGETALAKLIRQAEQASVRIEATNAPYDAKDALKARG
YRWHAEKRTWWTELPAVNEHAELDWLRDTCFCARPSVISVTWMQRHRG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctatccccgcccgagcaagccgcggccttactcgacgagcatcctgactac
cgggtgctgcgcgccctgccacgcccggaatgctatcccgtcgcccagccacagggcctc
gtacgcaccgccgtcgtgatcgacgtcgagacgatgggcctcgaggcggatcacccgatc
atcgacctggcgatgcagcgcatcgcatttgacgagcgcggagtgattatccgggtcggc
cagccccgccaatggttcgaggatccggggatgccgatccccgccgagattacccggctg
accggcatcaccgatgccgatgtcgccggcaggcgtatcgatgccgacgcagcaacgagc
ctgatcgccagcaccaccctcgcgatcgcccacaatgccgcattcgatgctccccgcgtc
gagcggcgtctgcccgacgtggccggtcatgcctgggcctgctcgtgcaacgaggtgccc
tggccggatctcggctttgacggccgcaagcttggccacctcctcatgcagcagggcttg
ttccatcaggggcaccgggctgcggtcgacgtctgggcgacgatcaatctgctcggtcgc
gtcatgccagacggcgaaacggctttggcgaagctcatccgccaagctgagcaggccagc
gttcggatcgaggcgaccaatgccccgtatgatgccaaagacgccttgaaagccagggga
tatcgctggcatgccgaaaaacgcacgtggtggaccgagctccccgccgtaaacgaacac
gccgaactcgactggctgcgcgatacctgtttctgcgcccgaccctctgtcatatccgtc
acctggatgcagcggcatcggggatga
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