Sphingomonas naphthae: PQ455_20000
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Entry
PQ455_20000 CDS
T08850
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snap02000
]
PQ455_20000
01504 Antimicrobial resistance genes [BR:
snap01504
]
PQ455_20000
Transporters [BR:
snap02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PQ455_20000
Antimicrobial resistance genes [BR:
snap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PQ455_20000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
SHOCT
Qn_am_d_aIII
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WCT75789
LinkDB
All DBs
Position
unnamed2:16136..17209
Genome browser
AA seq
357 aa
AA seq
DB search
MARFAHIVPIALLLLPACRDEPQVRDERRAVAVQRIRADAGIGTTYAGEIRSAFESQIGF
EVAGRIVERRVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSGSARTAAAVQQADLARSR
ELLKQGFISPAEFDQQKAAAVQAQAQLRAAGAQSGTASAQLGRTVLTAPRAGVVTQIQGE
VGQVVGAGQAIVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSSPGRRYAARLRSIS
GAADPATRTFAARLSVDAPAQALLMGETAELRVEGDAGDAAVRVPLTAVLQSNGRAQAWV
LDRRTMVVQPRAVQIGAAQGDMLTIRSGLKPGETIVTAGVHLLRAGEKVRIVQVPQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttgcccatatcgtaccgatcgcgttgctgctgcttccggcctgtcgggat
gagccgcaggtcagggatgaacgacgcgccgtggccgtccagcgcattcgcgccgatgcc
ggcatcggcacaacctatgccggcgaaatccggtccgccttcgaaagccagatcggtttc
gaagtggcgggccggatcgtcgagcgcagggtcgaccttggcagcagcgtccatgcgggc
cagacgttgctgcgtctcgacaacagcgattatgcgcgggcgctggacagcgcggcggcg
cagagcggttcggcccggaccgccgccgccgtgcagcaggctgatctggcgcggtcgcgc
gaattgctgaagcaaggcttcatttcccccgcagagttcgatcagcagaaggcggcggcc
gttcaggcgcaggcgcagttgcgtgccgccggcgcccagagcggaacggcatcggcgcag
ctgggccgcaccgtcctcacggcgccgcgcgccggcgtcgtcacgcagattcagggcgag
gttggtcaggtcgtgggcgcgggacaggcgatcgtgacgctggccgatccgtcccggccg
gaaatcgcggtggcgctcccggaaggcagtctggaccggatccggtccgcctcacgattg
agtgtgagcgtgtggagcagcccgggccggcgttatgctgccaggctccgcagcatatcg
ggcgctgccgatcctgcgacgcggacctttgcggcacgcctgtccgtcgatgcgccggca
caggcgctgctgatgggcgaaaccgccgaattgcgggtcgaaggcgatgccggcgatgcc
gccgtccgcgtgccgctgaccgccgtgctgcaatccaacggacgcgcgcaggcttgggta
ctcgaccggcgaacgatggtggtgcagccgcgcgccgtgcagatcggcgcggcgcagggc
gacatgctgaccatccggtccggcctgaaaccgggcgagaccatcgtcacggccggggtg
catctgctgcgtgcgggcgagaaggttcgtatcgtgcaggtgccgcagtcatga
DBGET
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