Sphingomonas naphthae: PQ455_20450
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Entry
PQ455_20450 CDS
T08850
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_20450
Enzymes [BR:
snap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PQ455_20450
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PQ455_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WCT75753
LinkDB
All DBs
Position
unnamed2:95789..97339
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AA seq
516 aa
AA seq
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MTLLIPILGDQLSHDLASLRDVGKSDTVLLLMEVAEETTYVRHHKRKIALILAAMRHFAE
EARAAGWTVDYVRLDDPENSGSFTGEVARAVSRHSPHAIRIVEPGEWRVREMIDGWAARF
DLPVEIISDDRFICGILEFQTWAQSRNDLVMEFFYREMRRKTGLLMTADGQPEGGAWNLD
KENRAPPKRGLNYPEPMHFTPDDVTNDVIATVAALFGDHFGRLEKFALPVTAAQARRALA
HFVRTALPDFGTYQDAMVTGQDWLYHSWLSPALNLGLLTPLEVAQAAADAYAAGTVPLNA
AEGFIRQIIGWREYVRGYYWLEMPDVATANALEATRPLPEFYWTGETDMRCMAEAIRNTR
DHAYAHHIQRLMVLGNFAMLAGVRPQDVADWFLVVYADAYEWVELPNVIGMSQHADGGRL
ATKPYAGGGSYINRMSDHCGGCRYDVKLKVGPDACPLNALYWDFLARHERRFRRNRRMVQ
MYANWDRMKPEVRDAYRASAATFLDPIEPAARGWAR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcctcataccgatcctgggcgatcaactctcgcatgatctggcctccttgcgc
gacgtgggcaagagcgacaccgtgctgctgctgatggaggtcgcggaagagaccacctat
gtgcgccatcacaaacgcaagatcgcgctgatcctggcggctatgcgccattttgccgag
gaagcccgcgcagcgggctggacggtcgactatgtccggctcgacgacccagagaatagc
ggcagctttacaggcgaggtcgcgcgggccgtatcgcgccacagtcctcatgcaatccgg
atcgtcgaaccaggtgagtggcgcgtccgggagatgatcgatggctgggccgcacggttt
gacctgccggtcgagatcatcagcgacgatcgcttcatctgcggcatattggagttccag
acctgggcgcagtcgcgcaatgatctggtgatggagttcttttaccgggagatgcgccgc
aagacgggcctgctgatgaccgccgacggccagccggaaggcggtgcgtggaacctcgac
aaagaaaaccgcgcaccgcccaagcgcggcctgaactatcccgagcccatgcatttcacg
ccagacgacgtcacgaacgacgtgatagcgacggttgcggcgctgttcggcgatcatttc
ggacggctggaaaaattcgcgctgcccgttacggcggcccaggcccggcgcgcgctggcc
catttcgtccggaccgctctgcccgatttcggcacctaccaagatgccatggtgacaggg
caggactggctctaccatagctggctcagccccgcgttgaacctcggcctgctgacaccg
ctggaggtcgcgcaggccgccgccgacgcctatgctgccggcaccgtgccgctcaacgct
gctgagggctttatccgccagatcattggttggcgcgaatatgtgcgcggctattactgg
ctggagatgccggacgtcgcgacggccaacgcgctggaggcgacgcggccattgccggaa
ttctattggaccggcgagactgacatgcggtgcatggcggaagcgatccgcaacacccgc
gaccatgcttatgcgcaccacatccagcgattgatggtcctgggcaatttcgcgatgctg
gcgggcgtgcgaccgcaggacgtcgccgactggtttctggtggtctatgccgacgcctat
gagtgggtcgagttacccaatgtcatcggcatgagccagcacgccgatggtggccgcctg
gcgaccaagccctatgccggcggcggctcctatatcaaccgtatgtcggaccattgcggc
ggctgtcgctacgatgtgaagctgaaggtcggccccgatgcctgtccgctcaacgccctc
tactgggactttctggcgcgccatgaacgccgctttcgccgcaatcgtcgtatggtgcag
atgtacgccaactgggaccggatgaaaccggaagtccgcgacgcttatcgtgccagcgcc
gcgacctttctggaccccatcgaaccggcagcgcgaggctgggcgcgctga
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