Sphingomonas naphthae: PQ455_20810
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Entry
PQ455_20810 CDS
T08850
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_20810 (vsr)
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PQ455_20810 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Cir_N
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
WCT75866
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All DBs
Position
unnamed3:complement(40719..41126)
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AA seq
135 aa
AA seq
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MDTLDPAARSERMRRVRGKNTRPEMVVRRLAHRLGYRFRLHRRDLPGSPDLVFPGRRAVI
FVHGCFWHQHDCSRGARRPSNNAAYWHPKLARNVERDREARQRLESEGWRVLVLWECEMR
NSEQLSRRLTGFLDP
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcttgatcccgcagcgcgatcagaacgcatgcgccgcgtgcgtgggaagaac
acgcggccggagatggtggtgcgccggttggcgcatcggctcggctaccgcttccgcctt
caccgccgcgatctgcccggcagccccgatttggtgttcccagggcgcagggcggtcata
ttcgtgcacgggtgcttctggcatcagcacgactgctcgcggggggcgcggcgcccctcc
aacaacgcagcgtactggcatcctaagctagccagaaacgtcgaacgggacagggaagct
cggcagcggcttgagagcgaaggttggcgcgtcctggtgctatgggaatgcgaaatgcgc
aacagcgagcagctgtcccgccgattgaccggcttccttgatccttaa
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