Candidatus Sneabacter namystus: FZC37_00875
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Entry
FZC37_00875 CDS
T10120
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
snay Candidatus Sneabacter namystus
Pathway
snay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZC37_00875 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snay03019
]
FZC37_00875 (pnp)
03016 Transfer RNA biogenesis [BR:
snay03016
]
FZC37_00875 (pnp)
Enzymes [BR:
snay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FZC37_00875 (pnp)
Messenger RNA biogenesis [BR:
snay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FZC37_00875 (pnp)
Transfer RNA biogenesis [BR:
snay03016
]
Prokaryotic type
tRNA degradation factors
FZC37_00875 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
QEK39492
UniProt:
A0A5C0UJ53
LinkDB
All DBs
Position
209378..211624
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AA seq
748 aa
AA seq
DB search
MERFKKTGLYEKSLQFGSGTLVLQSGKIAKQSDGAILATVGDTVVLNTVVLGKEPLASCN
FLPLSVHYREMFSAAGKFPGGFLKREGKISDREVLISRLIDRALRPMFEDHFFHEVQIIS
HVLSYDPNFDPAMIAMVGASAALSISGAPLVGISGAVRVAKLDKEVIVNPSIQQIKASDV
NLVVSATHREIVMIESEAKEVKEDDLSSLLKTAMDSIAHIVDCMEEMKKEIGKEFIWRSN
TVQDVERVNLAQAFEHRVQEGLNISCKYERVGYFELLSREILEKCQDDDVSLSDVKKDVE
KLLKSIMRDNVIEGRGRIGGRNNTEIREIECESGIFPRTHGSALFTRGDTQVIATVTLGT
EDDGQIIGNVIDDYRESFMLHYSFPPFAAGECGALRAPGRREIGHGQLARKAINAVMPSK
EQFPYTVRVCADVTESDGSSSQATICAGILSLMDAGVPIKSMIAGIAMGMVQEKDKLAIL
SDIAHEEDSFGDIDFKVAGSVEGVTALQLDSKLPCLTLDTLITALSQAKDGRLHILSKMK
NTISVPREKLSRYAPSFHTLNIAKDSIKDLIGPGGKVIRDICEKTGAKINVNDDGVVTVA
AVDAAAVEKAILMIRGVTGASAEIGTKFEGRIVKIIDSGIFVDCGMGKDAFVHISEVSHS
TVNDLRDCFSEGEKVNMVVIGEDRGRVRFSIKDYDVEVSVLIEKNKRKRSRNSEHGKNDQ
SGKFERSRKRMRNEHWKRDKAEEKFKNR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagagatttaagaagactgggttgtatgaaaaatcgctgcaatttggttctggtact
ttagtgttgcaatctggaaaaattgctaaacaatcggatggtgctatccttgcaacagtt
ggggataccgtggttctgaatactgtggtacttggcaaagagccgttggcatcgtgtaat
tttcttcctttatcagtgcattatagagagatgttttctgctgctggtaagtttcctggt
ggatttttaaaaagagagggtaagatttcagatagagaggttttaatctcaaggttgata
gatagggctttgcgtcccatgtttgaagatcacttttttcatgaggtacagattatttct
catgttttgtcttatgatccaaattttgatcctgcgatgatagctatggtcggagcctct
gctgctctttctatttctggagctccgttagttggtatatctggagctgtgcgagttgcc
aaactagacaaagaagttattgttaatccttcaatacagcaaatcaaagctagcgatgta
aatttagttgttagtgcaacgcatcgtgagattgtgatgattgagtctgaggcaaaagag
gttaaagaggacgatttgtctagtttattaaagactgctatggattccattgctcatatt
gtggattgtatggaagaaatgaagaaagagataggtaaggagtttatttggcgctctaat
acagtacaagatgtagagcgtgtgaatcttgctcaagcatttgaacatagagtgcaagaa
ggtttgaacatttcttgcaagtatgaaagagttggatactttgagttattaagtagagaa
atattagaaaaatgtcaagatgatgatgtatcgttgtctgatgtaaaaaaagatgtggaa
aagcttttaaagagtataatgcgtgacaatgttatcgaaggtagaggtcgaatcggtggt
agaaataatacggaaataagagagatagaatgtgaatcaggtatctttcctcgtactcac
ggatctgccctatttacaaggggtgatacgcaagttattgctactgttacgcttggaaca
gaagatgatgggcaaattatcggtaatgttattgatgattatagggaaagctttatgttg
cattattcttttcctccgtttgcagctggtgagtgcggagcgcttagagctcctggtaga
agggagatagggcatggtcagttggctcgcaaggccatcaatgccgttatgccttctaaa
gaacaatttccttatactgtaagggtatgtgcagatgtgacagagtcagatggttccagt
tctcaagctactatttgtgctggaatacttagtttaatggatgcaggagtgcctataaag
agtatgattgcaggtattgctatgggtatggttcaagaaaaagacaagcttgctatatta
tctgacattgctcatgaagaagatagttttggtgatatagatttcaaagttgctggttct
gtagaaggggtaacagctttacagctcgatagtaaattaccttgcttaactctggataca
ttgataactgctttatctcaggcaaaagacggtaggttgcatatattgtctaaaatgaaa
aatacgatatcagttcctagggaaaagttgagtcgatatgctccatcttttcatacacta
aacatagcaaaggattccataaaagatcttattggtcctggaggtaaggtaatacgggat
atttgcgaaaagactggtgcaaaaataaatgttaatgatgacggtgtagtgactgttgca
gctgtagatgctgctgctgtggaaaaagcgatactcatgattcgtggtgttactggggcc
tcagctgaaataggtactaaatttgaaggtcgaatagttaaaattatagattctggtatt
tttgtagactgcggaatggggaaagatgcctttgtgcatattagtgaagtatctcattct
acagttaatgatcttcgagactgtttttcagaaggagagaaggttaatatggttgtcata
ggagaagatagagggagagtgcgtttttctatcaaagactacgatgtagaggttagcgtt
ttaatagaaaagaataaaaggaaaagaagtaggaatagcgagcatgggaagaacgatcaa
agtggaaagtttgaaagaagtagaaagcgtatgaggaatgaacattggaaaagagataaa
gctgaggaaaaatttaagaataggtaa
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