Candidatus Sneabacter namystus: FZC37_01900
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Entry
FZC37_01900 CDS
T10120
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
snay Candidatus Sneabacter namystus
Pathway
snay03030
DNA replication
snay03430
Mismatch repair
snay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZC37_01900 (dnaE)
03430 Mismatch repair
FZC37_01900 (dnaE)
03440 Homologous recombination
FZC37_01900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snay03032
]
FZC37_01900 (dnaE)
03400 DNA repair and recombination proteins [BR:
snay03400
]
FZC37_01900 (dnaE)
Enzymes [BR:
snay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZC37_01900 (dnaE)
DNA replication proteins [BR:
snay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FZC37_01900 (dnaE)
DNA repair and recombination proteins [BR:
snay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FZC37_01900 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QEK39679
UniProt:
A0A5C0UIQ6
LinkDB
All DBs
Position
complement(395912..399364)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSDYRYKMKKFIHLKVQSGYSLLESIVRIDDLVDLACLNKMPALGLVDKGNMFGALEFSE
KASKKGIQPIHGTIVKVHFLNNKKHISELVLIAKNDIGYQNLLHLVSEFCVTENHTSLPF
SEIEKCKSGLIILSGYTKGLIGKLVLENRYSLAIELASKMQSTFGDNFYFEISRHGFKDE
CIETQYLQIARDLQIPVVATNEVLFLHKDMHDIHEIFLRIQHFSPDEKKVLYAKNSYFKT
EEEMEKLFYDLPEALENSVLIAKRCSVRATTRDPILPSFQDNVDEKEIIKTLSRDGLVHR
LSKITPDKANLLSDNKQYFERLEYELSVICEMGFAGYFLIISDLVQWAKKEGIPVGIGRG
SGVGSVVAWSLLITDLDPIEFGLIFERFLNPHRISMPDFDIDFCQNKREKVIQYVQNKYG
KKRVAHIITFGSLQAKAAIKDIARVLGLDFHIANKITEFIPFSAVNPVTLKKAIEKIPQL
QSLYKGKIVKEINIEDDEAHEVSELIEKTLKISLAIEGLPRHISTHAAGIIIAGIDLVQI
VPLYKSPHDDAILVQYSMKYAELSGLVKFDFLGLQTLTMISDCCKLLETRGVEIDISSIN
LKDKKTYDMLSKGKSMGVFQFESFGMRDNLTKLIPDKVEDLMALSSLYRPGPMEHIATYI
ACKFGNQKPSYMHPLLKPILEPTYGVIIYQEQVIEIAKAFAGYTAAKADLLRRAIGKKIA
SEMKKQEKEFTQGAVKNGIDISIANDVFSLIVKFAGYGFNKSHAAAYSVMSYQTAYLKAH
YPREFFVSFLNLELRDFVKVNLLISEFKEIGYNVIKPDINSSVAYFSLSEKDDKSIITGL
GLVKGTGIGIVQKIVSERQKSGQFTSISDFVYRMSDKDLSKKAIEGLILSGCFDSLHPDR
YQLYHNLDRIMSHMYSMYNKKSGIQTSFNALDTKILTLEKQRITEDIFSRLYDELEYTGI
FLSGHPASEYFSFLEEKRIRPFTFVKTLQDGIHYVNLAVVILKKDVRSSNRGVFANLIVS
DPTSTFEVSIFNENLLRDVSHKLQLKTAVILKCEIYKSDNSMRITVAGVELCDDILQTRQ
HTINLSVNNTEELLNCINLLKNCPYKEQGNVQVVFFLKTEFGLDAKVALPMLFEMKYANI
RALQPFSIKR
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattatagatataaaatgaaaaaatttatacatcttaaagttcaaagtggttat
tcattacttgaaagtatcgtaagaatcgacgacttagtagatcttgcatgtttaaataag
atgccagccctcggattggttgataaaggaaacatgtttggagctttggaattttcagaa
aaggcaagcaaaaaaggtattcaaccaatacacggaaccattgtaaaagtacattttttg
aacaacaaaaaacacatatcagaacttgtattgatagctaaaaatgatattggatatcaa
aatttactacatttagtaagtgaattttgtgtaacagaaaatcacacctcattacctttt
agtgaaatagaaaaatgtaaaagcgggctaatcatattatcaggatacaccaaagggtta
ataggaaagctagtattagaaaacagatattctcttgctatcgaattagcatctaagatg
caatctacctttggtgataacttttattttgaaatttcacgtcatggcttcaaagatgaa
tgcatagaaactcaatatctgcaaatagcacgtgatctacaaataccggtagttgctaca
aatgaggtactttttctacacaaagatatgcatgatatacacgaaatcttcctacgtatt
caacatttttcccctgacgaaaaaaaggttttatacgccaaaaattcttacttcaaaaca
gaagaggaaatggaaaagctcttttatgatttaccagaagccctagaaaattctgtacta
attgcaaaacgttgcagtgttagagcaacaacaagagacccaatattaccatcttttcaa
gataacgttgacgaaaaagagataataaaaacattatctagagatggacttgtacacagg
ttatcaaaaatcactcctgacaaagcaaacttgttatcagataacaaacaatattttgaa
aggctggaatatgagctttctgttatttgtgaaatgggatttgccggatattttttaata
atatctgatcttgttcaatgggccaaaaaggaaggtattcctgtaggtataggtagagga
tctggagttggttctgttgttgcatggagtttattaataacagacctagatccgattgaa
tttggcctgatatttgaacggttcttaaaccctcatagaatctctatgcctgattttgac
atagatttttgtcaaaataaaagagagaaagtaatacaatacgtacaaaataaatacgga
aaaaaaagagtagctcacataatcacgtttggaagcttacaggcaaaggctgcaataaaa
gacatcgcaagagtgttgggattagactttcacatagcaaataaaataactgaatttata
ccatttagtgctgttaatcctgttactttaaaaaaagctatagagaaaatcccccagcta
cagtcattgtataaaggaaaaatcgtaaaagaaataaacatcgaagatgatgaggcacat
gaagtcagtgaactaattgaaaaaacattaaaaatatctctagctatagaaggactgccg
agacacatctccacacatgcagcaggcataataattgctgggatagatttagtacaaata
gttccattatacaaatctccacatgatgatgcgattttagtacaatattcaatgaaatac
gcagaattatcagggttggtaaaatttgatttcctagggctacagaccctaaccatgata
tcagactgctgcaaacttttagaaacaaggggcgttgaaatagatatctcatctattaat
ctaaaagataaaaaaacgtacgacatgctttccaaaggaaaaagtatgggagtattccaa
tttgaaagttttggtatgagggataatttgacaaaactgataccagataaagtagaggat
ctgatggctttatcgtcattgtacagacctggccctatggagcatatagcaacttatatt
gcttgcaaatttggtaatcaaaaaccttcatatatgcaccctttattaaagcctatatta
gaacccacatacggtgtaataatttaccaagagcaagtaatagagatagcaaaagcattc
gctggttatacagctgcaaaagccgatttgttaagacgcgctatcgggaaaaaaatagca
tcagaaatgaaaaagcaggaaaaagagtttactcaaggagctgtaaaaaatggaatcgat
atatctattgcaaatgatgtattttctttgatagttaaatttgccggatatggatttaat
aaatctcatgctgcagcatactctgtaatgtcttatcaaacagcttatttgaaagcacat
tatcctagagagttttttgtttcctttctaaacctagaattacgagatttcgttaaggta
aaccttcttattagcgaattcaaagagataggatacaatgtcattaaacctgacataaac
tcaagtgttgcgtatttctccctttctgaaaaagacgataaatcaataatcaccgggcta
ggattagtcaaaggtacaggcataggtatagtacaaaaaatagtcagtgaacgtcaaaaa
tcaggacaatttacctctatttctgactttgtgtatagaatgtcagataaagatttatca
aaaaaagcaattgaaggattaatcctttcagggtgttttgactctttgcaccctgacaga
tatcagctatatcataatctagacagaattatgtctcatatgtactctatgtacaacaaa
aaatcaggtatacaaacaagttttaacgccctagacactaaaatacttacattagaaaaa
cagcgaataacggaagacatattcagtcgtctgtacgacgagttagagtacaccggaata
tttttatcaggacatcctgcatcagaatacttttcatttttagaagaaaaacgaatacgc
ccttttacttttgttaaaacattgcaagatggaattcattacgtcaatttagctgttgtg
atactaaaaaaagatgtgcgtagctctaatcgaggcgtttttgcaaacttaattgtatct
gatcctacttctacatttgaggtgagtatatttaacgaaaatttactaagagacgtaagc
cataaactgcaactaaaaacagcagttatattaaaatgtgaaatctataaatcagataat
agcatgcgtattacagtcgcaggtgtagaactatgtgacgatatattgcaaacgcgacaa
catactattaaccttagcgtaaacaatactgaagagttgctaaactgcataaatctttta
aaaaattgtccttacaaagaacaaggcaatgtacaggtagtctttttcttgaaaactgaa
tttggtttagacgctaaagtggccttgcctatgctttttgaaatgaagtatgctaacata
cgtgctttgcaacctttttctatcaaacgatga
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