Candidatus Sneabacter namystus: FZC37_01965
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Entry
FZC37_01965 CDS
T10120
Name
(GenBank) AAA family ATPase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
snay Candidatus Sneabacter namystus
Brite
KEGG Orthology (KO) [BR:
snay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snay03400
]
FZC37_01965
Enzymes [BR:
snay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZC37_01965
DNA repair and recombination proteins [BR:
snay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FZC37_01965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEK39691
UniProt:
A0A5C0UJB1
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All DBs
Position
complement(410554..413847)
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AA seq
1097 aa
AA seq
DB search
MSFTQNIPQIQASDPNISTWVMASAGTGKTKVLIDRIMRLLINGVDPAKILCITFTNTAS
NEISYRIKHNVENWIKYDSSELKKVLFDLTGKHFSDQNLKKIKNTLNTFEKKIQDMKICT
IHAFCQYSLKRFPFEASISPSFRVINEITEAQIRKNIIEEIFNLQECEQALKRLSLHFHE
STIYDIIHSTSSTNVVSIIKNFATEEKYKSFLISETNFQCTNQKKILSQVINLVSDINLL
QWQPFNTTCGDIEFLSVLKNYYELSVEERAIRWRELIPLFINSSGNKKIRLISQKLTCEA
PDLIKLLLNLQDELFNCLKKVEHNNLIEASTAFFCIAQIFSSRFEKYKRDKGFLDYRDLI
RYTKHLFTESKDKDWVMYKLDGGVDHILVDESQDTSKEQWEVITALMNDFFSGESSETHK
TFFIVGDEKQSIYSFQGACVDTLKKVKKHFESSALSANRPFKNIQLNHCYRSSQLIIDFV
ERVLNASDCFVNVPKLLSSSADSPSRIEVWPITMLNKKREELFWPLPCASYQIDSASYTL
AVQIAQRIKNLLQSRIILPSTKKTIRKKDIAILIQRRTKFAKILVSTLCEEGISVSGLDK
VTLHDNLTIMDVVAIAKFVLLPTDDLNCAILLKSPIFSLSEDQLYELRSSNSTKQTLWYK
IQHDLFYRTICTDMMQWIEAYNTTEGVFDFFYIILNCMGVRKLLLQDNNKQDGDILDEFL
HLIKKFEKETQGNLYQFIQWFENTDVCVTRDNVDKADSVNIMTVHSAKGLEFPVVIISDA
TSVSISDKFVFVENDKVALCYPPTLTKKIQARKKQNFDADYQEYLRLMYVAFTRCQDYLI
ICGSTSRNNVSSNCWYNLAKSVLMEDTTALKHCVLENSEKEKQDIMFWESKPFETKDFED
YDTQVQHANDVIFKEYNFAIEKLRRSNVANSFSHYVPQEKSMHYGRIMHKILEHIVGGNT
WDNITPLLQHISTGARAQAMHQLHLLTTSNMWKDLMQGKVCSEVNIVSHQNDNCTKIFRL
DLLIETENNVTVIDYKTGDRSKCSTEVIFKYNEQMHRYLQCVEKLHPNKTIKGYLLWLHD
MSFSDVPFKKGQLSYFD
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcactcaaaatattcctcaaattcaagcatctgaccctaacatatctacttgg
gttatggcttctgcaggcactggaaaaacaaaagttcttatagatagaataatgaggctg
ctaataaatggagtagatcctgcaaaaattttatgtattacctttactaacactgcttct
aatgaaatatcgtatcgaataaagcacaacgtagaaaattggattaagtatgactcttct
gagttaaaaaaagtactttttgatttaacaggtaaacatttttcagatcaaaatctaaaa
aaaataaaaaatacattaaatactttcgaaaagaaaattcaggacatgaagatatgtact
atacatgcattttgccaatatagtttaaaaaggttcccttttgaagcatccatttctcca
tcttttcgtgtcataaatgagataacagaagcacaaatacgaaaaaatattatagaagaa
attttcaacttacaagaatgcgaacaagcactcaaacgcctatctctacattttcatgaa
agtacaatctacgatattatacacagtacgtcctctacaaacgtagtatctatcatcaaa
aattttgcaacagaggaaaaatacaaatcttttttaatctcagagacaaattttcaatgt
acgaatcagaaaaagattttatcccaagttattaatcttgttagtgatatcaatttactg
caatggcaaccttttaacacaacctgtggagatatagagtttttgtccgtcttaaaaaat
tactacgaactttcagtagaagaaagagccattagatggcgcgaattaataccacttttc
attaactcttcaggtaataaaaaaataagattaatttctcaaaaattgacatgtgaagct
cctgatctgatcaaattattattaaatttacaagatgagttatttaattgcttaaaaaag
gtagaacataataatttaattgaagctagcaccgcctttttctgcatagcacaaattttt
tcatctagatttgaaaaatataaacgcgataaaggatttctagattaccgagatttaatt
agatataccaaacatttatttacagaaagtaaagataaagattgggtaatgtataaatta
gatggaggtgttgatcatattttagtagatgaaagccaggataccagcaaagagcaatgg
gaagtgattacggctctcatgaacgattttttctcaggtgaatcaagtgagacacataaa
accttttttatagtaggagatgaaaaacaatctatttatagctttcaaggtgcatgcgtc
gacacattgaaaaaagtaaaaaaacattttgaatctagtgcgttgagtgcaaatcgacct
tttaaaaatatacaattaaatcactgctatcgatcttcgcaattaattatagattttgtg
gaaagagtgttaaatgcttctgactgttttgtaaatgtacccaaattactatctagtagt
gcagacagtccaagcagaattgaagtttggccaattaccatgttaaacaaaaaaagagaa
gagttgttttggccgctaccatgtgcttcttatcagatagattctgcctcatataccctt
gctgtacagatagctcaacgtattaaaaatttgctgcaaagtaggataattttaccctca
accaaaaagacaattcgtaaaaaagacattgctatccttattcaaagaagaacaaaattt
gctaagatattggtatctactttatgtgaagaaggaatatctgtatcaggtttagataaa
gtcacattacatgacaacttaacaattatggatgtagttgctattgctaaatttgttctt
ttaccaactgatgatctgaattgcgctattttacttaaatctcctattttttctttatca
gaagatcagctatacgaacttaggtcatctaatagtacaaaacagacattgtggtataaa
attcaacacgatctattttatagaacaatttgcactgacatgatgcaatggatagaagct
tacaatactacagaaggagtatttgacttcttttatattattttaaactgcatgggtgta
agaaaattattactacaagataacaacaaacaagatggagatattcttgacgaattttta
cacctaattaaaaaattcgaaaaagaaactcaaggaaatttgtatcaatttattcaatgg
tttgagaacacggatgtttgtgttacacgtgacaacgtagacaaggcagattctgtaaat
atcatgactgtacattctgctaaaggattggaatttccggtggttattatttcagatgcc
acttctgtttctatatctgataagtttgtatttgttgaaaatgataaagtagctttgtgt
tatccaccaactttaacaaagaaaattcaagcccgtaaaaaacagaatttcgatgcagac
tatcaagaatatctaagactaatgtatgttgcatttactagatgtcaggattatttaata
atttgtggtagtacatctcgcaacaacgtttcttccaattgttggtataacttagcaaaa
tcagtattaatggaagatacaacagctttaaaacattgtgttttagaaaacagtgaaaaa
gaaaaacaagatataatgttttgggaaagtaaaccttttgagactaaagattttgaagat
tatgatacacaagtacaacacgctaatgatgtaatttttaaagaatacaattttgctatc
gagaagttacgtcgtagtaatgttgcaaattctttttcacattatgtgccacaagagaaa
agtatgcactatggtagaattatgcacaaaattctagaacacattgtaggcggaaacaca
tgggacaatattactcctttactgcagcacatatctactggggcgcgcgcgcaagcgatg
catcaattacatttgttaactacttcaaatatgtggaaagatctaatgcaaggtaaagta
tgctctgaagtgaatatcgtgtctcatcaaaatgataactgtaccaaaatctttagatta
gatttactaatagagacagaaaataatgtgacagtaattgattacaaaacaggagataga
agcaaatgttctacagaggtaatttttaaatacaatgaacaaatgcacaggtatctacaa
tgtgtcgaaaaacttcatccgaataaaacaatcaaaggctatcttttatggttgcatgat
atgagtttcagtgatgtaccttttaaaaagggtcaattgtcctattttgactaa
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