Candidatus Sneabacter namystus: FZC37_02645
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Entry
FZC37_02645 CDS
T10120
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snay Candidatus Sneabacter namystus
Brite
KEGG Orthology (KO) [BR:
snay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snay03016
]
FZC37_02645 (truB)
Enzymes [BR:
snay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FZC37_02645 (truB)
Transfer RNA biogenesis [BR:
snay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZC37_02645 (truB)
Prokaryotic type
FZC37_02645 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
OCIA
Motif
Other DBs
NCBI-ProteinID:
QEK39809
UniProt:
A0A5C0UJ37
LinkDB
All DBs
Position
complement(530670..531590)
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AA seq
306 aa
AA seq
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MVNDIFYCRGWHGWVNLYKPKGISSNKALCKLRKIIGNKSVKVGHAGTLDPLAHGVLPIG
IGHATRLIEYVVDCTKKYEFTMQFGVSTDTEDIEGNVTKTEVVDFDVSMLEVVSSKFTGS
MNQVPPNFSAVKVNGKRAYALARAGVQFSLSSRPVTIKDIRLLWYDNDLKQARYFVECSR
GTYVRSLSKDIADFLGVCATVIDITRISVGVFDSKSSISLSRFDSEKCDKENLYQHLLPL
GLVMGRIPKVLVTESQRCDLSFGRKVQLSDDVKDGTACAVYKGILVAVGRVADSNVFFPN
KIFESS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atcgtgaacgatatattctattgtcggggctggcatggttgggtaaatttgtataaacct
aaaggtatatcttctaataaggctttatgtaaactcagaaaaataataggtaacaagagt
gtgaaagtcggtcatgctggcactctagatccattagctcatggggttttacctattgga
ataggacatgctacaaggctgattgagtatgttgtagattgcacgaagaaatatgaattt
accatgcaatttggtgtttctactgatactgaagatatagaaggtaatgttactaaaaca
gaggtggtagattttgatgtatctatgttagaggttgtttcatctaaatttactggcagt
atgaatcaggtacctccgaatttttctgctgtaaaagtgaatggtaaaagagcatatgct
ctggctagggcaggggttcaattttctctttcaagcaggcctgtaacaattaaagatata
agacttttatggtatgacaatgacctaaaacaggcgcgatattttgtagaatgttctcgt
ggtacttatgtacgctcattatcgaaagatatagcggattttttgggtgtatgtgcaact
gttattgatattactagaatctcagttggggtattcgatagtaaatcttcaatttcattg
agcagatttgacagtgaaaagtgtgataaagaaaatttataccagcacttgttgccttta
ggcttggttatgggtagaatacccaaggttttggttacggaaagtcagcgatgtgatctg
tcgtttgggcgtaaggttcagttaagtgatgatgtgaaggatggaactgcgtgtgctgta
tataagggcattttagttgctgttggacgtgttgccgattctaatgttttttttcctaac
aaaatttttgaaagctcatag
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