Streptococcus pneumoniae 670-6B (serotype 6B): SP670_0173
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Entry
SP670_0173 CDS
T01308
Name
(GenBank) CapD protein, required for the biosynthesis of type 1 capsular polysaccharide
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
snb
Streptococcus pneumoniae 670-6B (serotype 6B)
Pathway
snb00541
Biosynthesis of various nucleotide sugars
snb00552
Teichoic acid biosynthesis
snb01100
Metabolic pathways
snb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SP670_0173
00552 Teichoic acid biosynthesis
SP670_0173
Enzymes [BR:
snb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SP670_0173
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
GFO_IDH_MocA
KR
adh_short
CoA_binding
NAD_binding_10
DXP_reductoisom
PDDEXK_10
DUF3842
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ADM90255
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Position
150518..152368
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AA seq
616 aa
AA seq
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MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTS
LAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIIL
FILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELEL
VGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNK
LGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGA
GGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLL
QVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDK
AVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVT
VTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESE
IPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDE
LKQAIIAFANQTTHIE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaactaacagattatgtgattgatctggtggaaattttaaataaacaacaa
aagcaggttttctggggaatatttgatattttcagtatggtggtttccatcattgtatct
tatattttattttatgggctgattaatccagcacctgttgactacattatctatacgagt
ttggccttcttgttctatcaattgatgattggtttttgggggttgaacgcgagcattagt
cgttacagcaagattacggatttcatgaaaatcttttttggtgtgactgctagcagtgtc
ttgtcatatagtatctgttatgccttcttgccactcttctccatccgtttcatcattctc
tttatcttgttgagtaccttcttgattttattgccacggattacttggcagttaatctac
tccagacgcaaaaaaggtagtggtgatggagaacaccgtcggaccttcttgattggtgcc
ggtgatggtggggctctctttatggatagttaccaacatccaaccagtgaattagaactg
gtcggtattttggataaggattctaagaaaaagggtcaaaaacttggtggtattcctgtt
ttgggctcttatgacaatctgcctgaattagccaaacgccatcaaatcgagcgtgtcatc
gttgcgattccgtcgctggatccgtcagaatatgagcgtatcttgcagatgtgtaataag
ctgggtgtcaaatgttacaagatgcctaaggttgaaactgttgttcagggccttcaccaa
gcaggtactggcttccaaaaaattgatattacggaccttttgggtcgtcaggaaatccgt
cttgacgaatcgcgtctgggtgcagaactgacaggtaagaccatcttagtcacaggagct
ggaggttcaatcggttctgaaatctgtcgtcaagttagtcgcttcaatcctgaacgcatt
gtcttgctcggtcatggggaaaactcaatctaccttgtttatcatgaattgattcgtaag
ttccaagggattgattatgtacctgtgattgcggacattcaagactatgatcgtttgttg
caagtctttgagcagtacaaacctgctattgtttatcatgcggctgcccacaagcatgtt
cctatgatggagcgcaatccaaaagaagccttcaaaaacaatatccgtggaacttacaat
gttgctaaggctgttgatgaagctaaagtgtctaagatggttatgatttcgacagataag
gcagtcaatccaccaaatgttatgggagcaaccaagcgcgtggcggagttgattgtcact
ggctttaaccaacgtagccaatcaacctactgtgcagttcgttttgggaatgttcttggt
agccgtggtagtgtcattccagtctttgaacgtcagattgctgaaggtgggcctgtaacg
gtgacagacttccgcatgacccgttactttatgaccattccagaagctagtcgtctggtt
atccatgctggtgcttatgccaaagatggggaagtctttatccttgatatgggcaaacca
gtcaagatttatgacttggccaagaagatggtgcttctaagtggccacactgaaagtgaa
attccaatcgttgaagttggaatccgcccaggtgaaaaactctacgaagaactcttggta
tcaaccgaactcgttgataatcaagttatggataagattttcgttggtaaggttaatgtc
atgcctttagaatccatcaatcaaaagattggagagttccgcactctcagtggagatgag
ttgaagcaagctattatcgcctttgctaatcaaacaacccacattgaataa
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