Streptococcus pneumoniae 670-6B (serotype 6B): SP670_1123
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Entry
SP670_1123 CDS
T01308
Name
(GenBank) UvrD/REP helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snb
Streptococcus pneumoniae 670-6B (serotype 6B)
Pathway
snb03420
Nucleotide excision repair
snb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SP670_1123
03430 Mismatch repair
SP670_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snb03400
]
SP670_1123
Enzymes [BR:
snb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SP670_1123
DNA repair and recombination proteins [BR:
snb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SP670_1123
MMR (mismatch excision repair)
Other MMR factors
SP670_1123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADM91186
LinkDB
All DBs
Position
complement(1046170..1047987)
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AA seq
605 aa
AA seq
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MVKSEEWFPKGDIILEETALGAVKDVTNCLVIAGPGAGKTELLAQKLDYLFSTNKCVSPK
KILALSFKTDAASNLKERVKKRYGDEYASRFTSLTYSAFEKRILDQFRDVLPEDIRPSRD
YLIEDWYTIKELLSMNGINVNGWRMSDIRRYVENIILNNGDNHKFKTDLLKGTQDNKPVL
LYRQITKLSTQIIDTNEYIRKALQMTYDFVFLDEFQDTTYAQYDLLKTCFLGSSCKLTAV
GDDKQAIMRWAGAKPDIFPDYIRDFNPNEYQLLMNHRSVPKLVEFQKEVHQILNSNHSSI
QTNNYPEFQEGEITLFEFENESLEAKLIANDIELKIQGGIRPSEICILAKQKVGIYSFEL
ISILNSKGIKARIENEYQDILKDPTCNLLLDLISCSQGKRDPLIWENISNFYGNINGIDE
LTDELILAKSYKEIDNIVSDITYLISNFIPNEESMLKLIDCIIEKIDEKRIISNFSTYNG
KSDLDIIVKNFSKLLYIEYSQTQGEWLDTVSSFKGENSIPIMTIHKSKGLEYEVVYFLGL
EDSAFWSFNNQPEEDKSAFFVALSRAKSHLIFTYCKLRNNSPQNNRNINEIYSLLTQSNL
VDVIN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagagtgaggagtggtttcctaaaggagatatcattttagaagagactgcatta
ggagccgtcaaagatgtgactaactgtttagtcattgctggaccaggtgctgggaaaact
gaattactagctcaaaagttagactatctattctctacaaataaatgcgtttctccgaaa
aaaattctagcattaagtttcaaaacggatgctgcatcaaatttgaaagaaagagttaag
aaacgttatggtgatgaatatgcttctcgttttacctcattaacctattcggcttttgaa
aagagaattttagaccaatttagagatgttctacctgaggatatacgaccatcaagagat
tatttgattgaagattggtatactataaaagaactactctctatgaatggaattaatgtt
aatggatggagaatgtcagatataagaagatatgtcgaaaacatcatacttaacaatggg
gataatcacaagtttaaaactgacttactaaaaggaacacaagataataagccggtcctc
ttgtataggcaaataacaaagttgagtactcaaataatagatactaacgaatacatccgt
aaagcacttcaaatgacatacgattttgtatttctagatgaatttcaggatactacatat
gcccagtatgatttattaaaaacttgttttttaggttcgtcttgtaaattaacagcagtt
ggagatgataagcaagccattatgagatgggcaggtgcaaagcctgatatttttccagac
tatattcgagactttaatccaaatgaatatcaattgttgatgaatcaccgctctgtacct
aagcttgtagaatttcaaaaagaggttcatcagatattaaatagtaatcacagttctatt
cagacaaataattatccagaatttcaagagggtgaaataacattatttgaatttgaaaat
gaaagtttagaagctaagttaattgcaaatgatatagaattaaaaattcaaggaggtata
cgaccatcagaaatttgtatcctagcaaaacaaaaggttggtatttatagtttcgaattg
atatctatattaaatagcaaagggattaaagcaagaattgaaaatgaatatcaggatatt
ttaaaagatcctacgtgtaacctattattagatttaatatcatgcagtcaaggaaaacga
gatcctttaatttgggaaaatattagtaatttttatggaaatatcaatggaatagatgag
ttaactgatgaattaattttagcaaaatcctataaggagattgacaatatagttagtgat
attacttacctaatttcaaattttattcccaatgaagaaagtatgctaaaattaattgat
tgtattattgaaaaaatagatgaaaaaagaattatttccaatttttcaacatacaatgga
aaaagtgacctagatatcattgtcaagaacttttcaaagttattatacatagaatattct
caaacacaaggtgaatggctagatacagtctctagtttcaagggtgaaaactcaattcca
attatgactatccataagagtaaaggattagaatatgaggtagtctattttctaggcttg
gaggattctgcattctggagttttaataatcagccggaagaagataaaagtgcattcttt
gtcgcactttcaagagcaaaaagtcacttaatattcacatattgtaaattgagaaataat
agtccgcaaaataatagaaatattaatgagatatattcattgctgactcaatccaattta
gttgatgttattaattaa
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