Streptococcus pneumoniae 670-6B (serotype 6B): SP670_2002
Help
Entry
SP670_2002 CDS
T01308
Name
(GenBank) pneumolysin
KO
K11031
thiol-activated cytolysin
Organism
snb
Streptococcus pneumoniae 670-6B (serotype 6B)
Pathway
snb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SP670_2002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
snb02042
]
SP670_2002
Bacterial toxins [BR:
snb02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
SP670_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Effector_1
Motif
Other DBs
NCBI-ProteinID:
ADM92054
LinkDB
All DBs
Position
complement(1868768..1870183)
Genome browser
AA seq
471 aa
AA seq
DB search
MANKAVNDFILAMNYDKKKLLTHQGESIENRFIKEGNQLPDEFVVIERKKRSLSTNTSDI
SVTATNDSRLYPGALLVVDETLLENNPTLLAVDRAPMTYSIDLPGLASSDSFLQVEDPSN
SSVRGAVNDLLAKWHQDYGQVNNVPARMQYEKITAHSMEQLKVKFGSDFEKTGNSLDIDF
NSVHSGEKQIQIVNFKQIYYTVSVDAVKNPGDVFQDTVTVEDLKQRGISAERPLVYISSV
AYGRQVYLKLETTSKSDEVEAAFEALIKGVKVAPQTEWKQILDNTEVKAVILGGDPSSGA
RVVTGKVDMVEDLIQEGSRFTADHPGLPISYTTSFLRDNVVATFQNSTDYVETKVTAYRN
GDLLLDHSGAYVAQYYITWDELSYDHQGKEVLTPKAWDRNGQDLTAHFTTSIPLKGNVRN
LSVKIRECTGLAWEWWRTVYEKTDLPLVRKRTISIWGTTLYPQVEDKVEND
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagcagtaaatgactttatactagctatgaattacgataaaaagaaactc
ttgacccatcagggagaaagtattgaaaatcgtttcatcaaagagggtaatcagctaccc
gatgagtttgttgttatcgaaagaaagaagcggagcttgtcgacaaatacaagtgatatt
tctgtaacagctaccaacgacagtcgcctctatcctggagcacttctcgtagtggatgag
accttgttagagaataatcccactcttcttgcggtcgatcgtgctccgatgacttatagt
attgatttgcctggtttggcaagtagcgatagctttctccaagtggaagaccccagcaat
tcaagtgttcgcggagcggtaaacgatttgttggctaagtggcatcaagattatggtcag
gtcaataatgtcccagctagaatgcagtatgaaaaaatcacggctcacagcatggaacaa
ctcaaggtcaagtttggttctgactttgaaaagacagggaattctcttgatattgatttt
aactctgtccattcaggcgaaaagcagattcagattgttaattttaagcagatttattat
acagtcagcgtagatgctgttaaaaatccaggagatgtgtttcaagatactgtaacggta
gaggatttaaaacagagaggaatttctgcagagcgtcctttggtctatatttcgagtgtt
gcttatgggcgccaagtctatctcaagttggaaaccacgagtaagagtgatgaagtagag
gctgcttttgaagctttgataaaaggagtcaaggtagctcctcagacagagtggaagcag
attttggacaatacagaagtgaaggcggttattttagggggcgacccaagttcgggtgcc
cgagttgtaacaggcaaggtggatatggtagaggacttgattcaagaaggcagtcgcttt
acagcagatcatccaggcttgccgatttcctatacaacttcttttttacgtgacaatgta
gttgcgacctttcaaaacagtacagactatgttgagactaaggttacagcttacagaaac
ggagatttactgctggatcatagtggtgcctatgttgcccaatattatattacttgggat
gaattatcctatgatcatcaaggtaaggaagtcttgactcctaaggcttgggacagaaat
gggcaggatttgacggctcactttaccactagtattcctttaaaagggaatgttcgtaat
ctctctgtcaaaattagagagtgtaccgggcttgcctgggaatggtggcgtacggtttat
gaaaaaaccgatttgccactagtgcgtaagcggacgatttctatttggggaacaactctc
tatcctcaggtagaggataaggtagaaaatgattag
DBGET
integrated database retrieval system
