Streptococcus pneumoniae TCH8431/19A (serotype 19A): HMPREF0837_11983
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Entry
HMPREF0837_11983 CDS
T01259
Name
(GenBank) YmdA/YtgF family protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
snc
Streptococcus pneumoniae TCH8431/19A (serotype 19A)
Pathway
snc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0837_11983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snc03019
]
HMPREF0837_11983
Messenger RNA biogenesis [BR:
snc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0837_11983
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
V-ATPase_G
DivIVA
KH_KhpA-B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADI70211
LinkDB
All DBs
Position
complement(1823690..1825303)
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AA seq
537 aa
AA seq
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MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
INEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagatcatgtcgcttgcgattgctgtttttgccgtcatcattggtttagtcattgga
tatgtcagcatctcagctaagatgaaatcatctcaggaagctgcagagttgatgctttta
aatgctgaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttactt
attaatgaagccaaacgtgaaagcaagtctcttaaaaaagaagcactattggaggccaaa
gaagaagccagaaaataccgtgaagaagtggacgctgaattcaaatcagaacgtcaagaa
ctcaaacaaatcgaaagtcgtttgacagagagagctactagccttgaccgtaaggacgac
aatttgacgagtaaagaacaaacacttgaacaaaaagaacaaagtatttctgatagagcg
aaaaaccttgatgcgcgtgaagagcaattagaggaagtcgaaagacaaaaagaagcagaa
ctagagcgtattggtgctctgtctcaggcagaagcacgagatattatcttggctcagaca
gaggaaaacttgaccagggagattgccagtcgcattcgcgaagctgagcaagaggtcaag
gaacgttctgacaaaatggccaaggacatcttggttcaagctatgcaacgtatcgctggt
gaatatgtagcggagtcaacaaactcaacagttcatctgccagacgatactatgaaggga
cgcattattggtcgtgaaggtcgtaacattcgtacctttgaaagtttgacaggggtcgat
gtgattatcgacgatacaccagaagtggtgaccttgtcaggatttgatccgattcgtcgt
gagattgcccgtatgactatggaaatgttgctcaaagatggtcgtatacatccagctcgt
atcgaagagttggttgagaaaaaccgtcaagagattgacaataagattcgtgaatacggt
gaggctgctgcctatgaaattggtgcgccaaaccttcatccagacttgatgaagattatg
ggacgtttgcagttccgtacttcatatggacaaaatgttttgcgccattcgattgaggtt
gctaagttggctggtatcatggcgagcgaacttggtgaaaatgcggctcttgcccgtcgt
gctggattccttcacgatatcgggaaagccattgaccatgaggttgaaggtagccacgtt
gaaatcggtatggaattggcccgtaagtacaaggaacccccagttgtggtgaatacgatt
gctagtcaccacggagatgttgaagctgagagcgtgatagcagttatcgtcgctgcagca
gatgccttgagcgcagcccgtccaggtgctcgtagtgagtctcttgaaagctacatcaag
cgtctccatgatttggaagaaattgctaacggctttgaaggagtgcaaactagctttgcc
cttcaagcaggacgtgaaattcgtatcatggtcaatccaggaaaaatcaaggacgacaaa
gtcacaatcttggctcacaaagttcgtaagaaaattgaaaacaatctcgattatccagga
aatatcaaggtaaccgtgattcgcgagcttcgtgcagtagattatgctaaataa
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