Streptococcus pneumoniae TCH8431/19A (serotype 19A): HMPREF0837_12248
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Entry
HMPREF0837_12248 CDS
T01259
Name
(GenBank) nucleic acid-binding domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
snc
Streptococcus pneumoniae TCH8431/19A (serotype 19A)
Brite
KEGG Orthology (KO) [BR:
snc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snc03019
]
HMPREF0837_12248
Messenger RNA biogenesis [BR:
snc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0837_12248
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADI70476
LinkDB
All DBs
Position
complement(2057880..2058833)
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AA seq
317 aa
AA seq
DB search
MRKNMKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIDGKLWDAQPHNI
EAFTAGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADFKVKSPVDVKEIRDYMSQ
MIFKIENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVY
PQLNKSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDT
KEEVVLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMS
NKIFAMDNRSFYKPDLD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaatatgaagattagtcacatgaaaaaagatgagctatttgaaggcttttac
ctaatcaaatcagctgacctgaggcaaactcgagctgggaaaaactacctagcctttacc
ttccaagatgatagtggcgagattgatgggaagctctgggatgcccaacctcataacatt
gaggcctttaccgcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaat
acccctcaagtcaatcaaattactctccgcctgcctcaagctggtgaacccaatgaccca
gccgatttcaaggtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaa
atgattttcaaaattgaaaatcctgtctggcaacggattgtccgaaatctctacaccaag
tatgataaggaattctactcctatccagctgccaagaccaaccaccatgcctttgaaacg
gggttggcttatcatacggcgaccatggtacgtttggcagacgctattagcgaagtttat
cctcagctcaataagagtctgctctatgcggggattatgttgcacgacttggctaaggtc
atcgagttgacgggaccagaccagaccgagtacacggtcagaggcaatcttcttggacat
atcgctctcattgatagcgaaattaccaagacagttatggaactcggcatcgatgatacc
aaggaagaagtcgttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatat
ggaagtccagtccgtccacgtattatggaggcagagattatccatatgattgacaatctg
gatgcaagcatgatgatgatgtcaacagctctggctttggtggataaaggagagatgtcc
aataaaatcttcgctatggataatcgttccttctataaaccagatttagattaa
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