Streptococcus pneumoniae ST556 (serotype 19F): MYY_0205
Help
Entry
MYY_0205 CDS
T02087
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
snd
Streptococcus pneumoniae ST556 (serotype 19F)
Pathway
snd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYY_0205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snd03019
]
MYY_0205
Messenger RNA biogenesis [BR:
snd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYY_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AFC93867
LinkDB
All DBs
Position
complement(190580..192259)
Genome browser
AA seq
559 aa
AA seq
DB search
MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
VNNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSQM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctaggagaa
atcgggaaaaacacttacggaattgaataccaagacgagattatcatcgtcgatgctggg
attaaattcccagaagatgacttgcttggtatcgactatgtcattcctgactactcttac
atcgtggacaatatcgaccgcgtcaaggctgttttaatcacacacggacacgaggaccac
attggtgggattccgttcctactcaagcaagcaaatgtccctatctacgctggaccgctt
gccttggctttgatccgtgggaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaatcaaccacaacaccgagttgacctttaaaaatctcaaggcaactttctttaga
acgactcactctattccagagcctttggggattgtcattcatactcctcaagggaaaatc
gtctgtacgggtgactttaagttcgactttactccagttggagaacctgcggacttgcat
cgtatggctgcgcttggtgaagaaggcgtgctctgtctcctgtctgactcgacaaatgcg
gaagtaccaacctttaccaactctgaaaaagtcgttggtcagtccattatgaagattatc
caaggtattgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caggcaacagaagctgctgttaagactggacgcaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacggaatcgatcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagattatcctgcaggagaagttcttatcctctgtacaggt
agtcagggtgagcctatggcagccctctctcgtatcgccaacggaacccaccgtcaagta
caattacaaccaggtgataccgttatcttctcttctagtcccatccctggaaacactact
agcgtcaacaagctgattaacatcatttctgaagctggtgtcgaagttatccacggtaaa
gtgaacaatatccatacatctggacacggtggccagcaagagcaaaaactcatgctccgc
ttgattaagccaaaatacttcatgcctgtccacggtgaataccgcatgcaaaaagtccac
gctggactagcagtggatactggtgttgagaaggacaatatctttatcatgagcaatggc
gatgtgcttgcccttactgctgactcagctcgtatcgcaggtcatttcaacgcccaagat
atctatgtcgatggaaatcgtatcggtgaaattggcgcagctgtcctcaaagatcgtcgc
gatctatctgaagacggtgtcgttctagcagtcgcaactgttgacttcaaatcgcagatg
attctgtctggcccagatatcctcagccgaggctttgtctacatgagagagtctggagac
ttgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcactgaaaaataag
gatgctagcgtgcaatctgtcaatggtgccattgtcaacgctattcgccccttcctctat
gaaaataccgaacgtgaaccgatcatcatcccgatgatcctcacaccagatgaagaataa
DBGET
integrated database retrieval system
