Streptococcus pneumoniae ST556 (serotype 19F): MYY_0641
Help
Entry
MYY_0641 CDS
T02087
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
snd
Streptococcus pneumoniae ST556 (serotype 19F)
Pathway
snd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYY_0641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snd03019
]
MYY_0641
03016 Transfer RNA biogenesis [BR:
snd03016
]
MYY_0641
Enzymes [BR:
snd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MYY_0641
Messenger RNA biogenesis [BR:
snd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYY_0641
Transfer RNA biogenesis [BR:
snd03016
]
Prokaryotic type
tRNA degradation factors
MYY_0641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
TPR_ZFYVE26
Hemerythrin
KH-I_KHDC4-BBP
SPATA25
PCB_OB
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
AFC94302
LinkDB
All DBs
Position
617485..619698
Genome browser
AA seq
737 aa
AA seq
DB search
MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHH
KDHKPKKEFTETPKDSE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtgtttcaaacgacttttgcgggtcgtgagttaattgtagagactggt
caggttgctaagcaagcaaatggatctgttgtcgtacgttacggtgagtcaactgtcttg
actgctgccgttatgtctaagaaaatggcaactggggatttcttcccactccaagtcaac
tacgaagaaaaaatgtatgcggctgggaagtttcctggtggctttatgaaacgtgaagga
cgtccttcaacagatgcgaccttgacagcgcgtttgattgaccgtccgattcgtcctatg
tttgcggaaggtttccgtaatgaagtccaagtcatcaatacagtgctttcttatgatgaa
aatgcatctgcaccaatggctgctatgtttggttcatctttggcactgtctatttcagat
attccatttgacggaccaattgctggggtacaagtgggatatgtagatggccaaatcatc
atcaacccaagtcaagaacaagcagagcaatctcttcttgaattgacagtagctggaacc
aagcacgctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttg
gaagcgcttcttaaagggcacgaagctgtcaaagaattgattgccttccaagaagaaatc
gttgctgctgtcggtaaagaaaaagcagaagtggaattgcttcacgtggatgctgaattg
caagctgaaatcattgcagcctacaacagtgacctccaaaaggcagttcaagtagaagag
aaattggcccgtgaagctgcaactcaagcagtgaaagaccaagtgactgccgtttacgaa
gaaaaatatgcggaccacgaagaatttgaccgtattatgcgtgatgtggctgaaatcttg
gaacaaatggaacacgcagaagtgcgacgtttaattacagaagacaaggtgcgtcctgat
ggtcgtaaggtcgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgta
catggttcaggtctctttactcgtgggcaaactcaagctctttcagtcttgaccttggct
ccgatgggagaaactcaaatcattgatggtttggatccagagtacaagaaacgctttatg
caccactataacttccctcaatattctgtaggggaaacaggtcgttacggtgcgccaggt
cgtcgtgaaatcggtcacggtgctcttggtgagcgtgctcttgctcaagtcttgccaagc
ttggaagaattcccatacgctatccgtctagtagcagaagttttggaatcaaacggttct
tcatctcaagcttctatctgtgcgggaactcttgcccttatggctggtggtgtgccaatc
aaggcgccagtagctggtattgctatgggacttatctcagatggaaataactacacagta
ttgacagatatccaaggtttggaagatcactttggagatatggacttcaaggttgcaggt
actcgtgatgggattacagcccttcaaatggatatcaagattcaagggattactgcagaa
atcttgacggaggctcttgctcaagccaagaaagcgcgttttgaaatccttgatgtcatt
gaagcaaccattccagaagttcgtccagaattggctccaactgctccgaaaattgatacg
atcaagattgatgtggacaagattaagattgtcatcggtaagggtggagaaaccatcgac
aagattattgctgaaacaggtgttaagattgatatagacgaagaaggaaatgtgtctatc
tactctagtgaccaagatgctattaaccgtgccaaagaaattattgctggtttggttcgt
gaagccaaagtggatgaagtttaccgtgctaaagtcgttcgtatcgagaaatttggtgcc
tttgttaacctctttgataagacagatgcccttgttcatatctctgagatggcttggact
cgtaccaatcgtgtagaggatttggtagaaatcggggatgaagttgatgttaaggttatc
aagattgatgaaaaaggccgtatcgatgcttctatgaaggctcttctacctcgtccgcca
aaacctgagcatgatgaaaaaggtgaaaagtctgagcgccctcaccgcccacgtcatcac
aaggatcacaaacctaagaaagaatttacagaaacaccaaaagattcagaataa
DBGET
integrated database retrieval system
