Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage): SPN23F12470
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Entry
SPN23F12470 CDS
T00843
Name
(GenBank) putative DNA helicase II, UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sne
Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
Pathway
sne03420
Nucleotide excision repair
sne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPN23F12470
03430 Mismatch repair
SPN23F12470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sne03400
]
SPN23F12470
Enzymes [BR:
sne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPN23F12470
DNA repair and recombination proteins [BR:
sne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPN23F12470
MMR (mismatch excision repair)
Other MMR factors
SPN23F12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
DUF3799
Dna2
AAA_30
DUF2800
DEAD
AAA_11
EST1-like_DNA_bind
DUF5470
Csa1
NdhM
Motif
Other DBs
NCBI-ProteinID:
CAR69050
LinkDB
All DBs
Position
complement(1213060..1217064)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTTLDFKTLFKEEYDKLNKQQKKAVDTVEGPVMVIAGPGTGKTQILSRRVANILTNYHTS
SEEIVCLTYTEAGASEMLDRLEKLIGEEGRKVRVSTIHAFCSELILRNSEIFGGQPKIIS
TAAKYEILKEIMDEYVIEGNPLYKNSGKRYSAKDQLLELFYKMKRENLNKEDFEKEIDEY
FKMIDLSIPGDDLYSKFKYARNSKSKDKKVGDYKDKAINELKENTQKLLAGVEIIEKYSS
DISNHNYFDFDDMILWTIEKLEENEGFQRSVSDTIRYLFVDEFQDTSVVQNKLVDLLVKG
KDNPNIFVVGDDDQSIYRFQGVSANNIRDFDKKYKPTKIVLDENYRSSQAIIDASRQLIS
HNPREEKLLIAAGANKDYDYQLPILKSYENAKAEMFGVLTEIKELIDSGVSPNEIGVIYG
RNSYGEEFAKILRDKGIFVQMKENKDLFSEPFFKKIVAILKYLCKPSRDVRELRKIVYFD
FFEVVLSQIVMIRNLKKDEKISIPTIAEIDQKLEIIRKKVNQSSKYLSPMYVLSDVLKSL
SIDEYIMKSKEKYHLVSVLNELYKLMLMECHIHPKLTVKGFLNQLSALEEMGISLPIEDI
SGSPSNCVQLMTAHGSKGLEFDHVFIMKCNDGKKKSEAWPGGENNSGRFSYPPSLNGKDE
NESQLKEEENRRLFYVAMTRAKKVLHLSYANDSTKTHLINEFEEFIDEVDVTESFEDCQS
VDKVVMPKFSNNVINEIFDELSLSVSTLNSFLKCPLSFYFNKGLKLPSETNEAMVFGSII
HEVLEKIYISVDGSQSSELTAKTVLSLEEALKLFETVFEEKSYQLTSNKIKKDDYARGKK
IIENLYKKSGYLKDGVVAVEVPIQGIRLGDILNTTVDLSEVSNIEINGKIDKIECDGNIV
CLVDYKTGNFENAKKKLVAPSEKEPLGGDYWRQAVFYYILFKNAGIDISDKEILVKYVLV
ENSTNEDGFSETEDIRITQKEVDIVLNQIKESIMKIKQGDFNCGCGVLKKDRDNYPCDYC
LQVSANTTPKFDNTEALEVATYQQTRGNYKSLSVSKLNRYLRCPKSIYFEDVLQLSQAAG
LSAGAKEKSTKITINHAPTGPVFGTAIHETMEKIYKEDLQLEDAIEFYDSSLYSHQEEII
DTMSVEELKEYGHNLLTNLFEHFIPNSLKGEHVSLEKELRVKLGDNYSINGIIDKLEFDN
DLIRVVDYKTGSAQRGVEELEVGHDYWRQAVFYNLLLENSSEIDTTDKRIETQYIFLDDN
STESGYSIHTIQVTKEDLDLVTSQIQNFWSHMNTADFTGSCGKNDCDYCRLAEFVDFELL
KETIESGKESNLVN
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgacaacattagattttaaaactttatttaaagaagaatatgataaacttaataaacaa
cagaaaaaagcagttgatacggtggaaggacctgttatggttattgctggtcctggaaca
ggtaaaactcaaattctgtcacgtcgtgtcgcaaatattttaacaaattatcatacaagt
tcagaagaaattgtctgtttaacatatacagaggctggtgcatcagaaatgttggataga
ttagaaaaattaattggagaagaagggcgtaaggtaagagtatcaactatccatgctttt
tgtagtgaattaatcttaagaaactctgaaattttcggtggacaaccaaaaattatctca
acagcagccaaatatgaaatcctaaaagaaattatggatgaatatgttatagaaggaaat
cctctttataaaaactctggtaaacgttattctgctaaagaccagctattagaacttttt
tataaaatgaaacgcgaaaacctgaacaaagaggattttgaaaaagagatagatgaatac
tttaaaatgattgatttatccatacctggagatgatttgtatagtaaattcaaatatgct
agaaattctaagtctaaagacaagaaagttggagattataaagataaggctataaacgaa
ttaaaagaaaatactcaaaagttacttgctggagttgaaattattgaaaagtatagctct
gatattagcaatcacaattattttgactttgatgatatgattttatggacaattgaaaag
ttggaggaaaatgaaggttttcaaagaagtgtatctgatactataagatatttatttgtt
gatgagtttcaggatacttcagttgttcagaataaacttgtagatttactagtaaaagga
aaagacaatccaaatatttttgttgtaggggatgatgatcaaagtatttatcgtttccaa
ggagtaagtgcgaataatattcgagattttgataagaagtataaacctacgaaaatagta
cttgatgaaaattaccgttcttcccaagctatcattgacgcttcaagacaactaatcagt
cataatccaagagaagagaaacttcttattgcagcaggcgctaacaaagattatgactat
caattgccaatcttgaaatcctacgaaaatgcaaaagctgaaatgtttggtgtgcttact
gagattaaagagctgattgattcgggtgtttctcctaatgaaataggagtcatttatgga
agaaattcttacggagaagagtttgcgaagattcttcgtgataaaggtattttcgttcaa
atgaaagaaaataaagatttatttagtgaacctttcttcaaaaaaattgtagctatttta
aaatatctttgtaaaccatcaagagatgttagagaacttcgaaaaattgtatattttgat
ttctttgaggtagtactatcacaaatcgtaatgatacggaatctaaagaaagatgaaaaa
atttcaatccccactatagcagaaattgatcaaaaattagaaatcattcgaaaaaaagta
aatcaatcatcaaaatacctatcgcctatgtatgtccttagcgatgtattaaaatcttta
agtatcgatgagtatattatgaagtcaaaagagaaatatcatttggtttctgttttaaat
gaactttacaagttaatgttgatggaatgccacatccatcctaaattgactgtaaaagga
tttttaaatcaattatcagctttagaagaaatgggaattagtctaccaattgaagatatc
tcaggttctccaagtaactgcgttcaattaatgacagctcatggttccaaaggactcgag
tttgatcatgtgtttataatgaaatgcaatgatggaaagaaaaagagtgaagcttggcca
ggaggtgaaaataattcaggtagattctcttatccaccaagtttaaatggaaaagatgaa
aatgaatctcaactaaaagaagaggagaaccgtcgcttgttttatgttgctatgactcgg
gcaaagaaggtgctccatctctcttatgctaatgattctactaaaacccacttaattaat
gaatttgaggaatttattgatgaggtagacgtgacagaatcttttgaggattgtcaatct
gtagataaagtggtaatgccgaaattttctaacaatgttatcaatgaaatttttgacgaa
ttgagtttaagcgttagtacattaaattcttttcttaaatgtcctttgagtttttatttc
aataagggattaaaattaccatctgaaacaaacgaagctatggtattcggtagcattatt
cacgaagtcttagaaaaaatatatatttctgtagatggttcacaaagttcagaattaact
gcaaaaacagtactttctctagaagaagctttaaaattatttgagacagtctttgaagaa
aaatcttatcaattgacttcaaataaaataaagaaagatgactatgctagagggaaaaag
attattgaaaatctttacaagaaatctggatacctcaaagatggtgtagttgcagttgag
gtacctattcaaggtattcgactaggcgatattttaaataccaccgtagacctatcggaa
gtatctaatatcgagataaacggaaaaattgataaaattgagtgcgacggcaatatagtg
tgtctagtcgactataaaacaggaaattttgaaaatgctaaaaagaaattagtagctccg
agtgaaaaagaaccccttggtggtgattattggcgtcaggctgtattctattatatcctc
ttcaaaaatgccggtatcgatatttctgacaaagaaatacttgttaaatatgttttggtt
gagaattcaactaatgaagatggtttttctgaaactgaagatatacgaatcactcaaaaa
gaagttgatatagtgcttaatcagattaaagaatctattatgaaaattaaacaaggcgat
tttaactgtggttgtggagtattgaaaaaggacagagataattacccatgcgactactgt
ctccaagtatcagctaacacaacacctaaatttgataatactgaagccttagaagttgcg
acttatcaacaaacacggggaaactataagagtttaagcgttagcaaattgaatcgttac
ctgcgttgtccgaagagtatctactttgaagatgttttacagttatctcaagcagctgga
ttatcagcaggagcaaaagaaaaatctacaaaaataacaatcaatcatgcccccacaggt
cccgtatttgggactgcaattcatgaaacaatggaaaaaatctataaagaagatttacaa
ttagaggacgcaattgaattctatgatagttcattgtactctcatcaagaggaaatcatt
gatacaatgtctgtagaagaattaaaagaatatggacataacttgttgactaatcttttt
gaacattttattcctaatagtttaaaaggggagcatgtttccttagaaaaagaacttcgt
gttaaattaggagataattactcaatcaatgggattatcgataagcttgaatttgataat
gatcttattcgagttgtagattataagacaggttctgctcaaagaggtgttgaggaacta
gaagttggacatgattattggcgtcaagcagtcttctataatcttttattagaaaattct
tctgaaatagatacgactgataaacgaattgaaactcagtatatttttcttgatgataat
agtactgaaagtggctattcaattcacactatacaagttacgaaagaggatttagactta
gttacatcacaaattcaaaacttctggtctcatatgaatacagctgattttactggtagt
tgtggtaaaaacgattgtgattattgtcgattagctgagtttgttgattttgaattatta
aaagaaactatagaatccggaaaagaaagtaatttagttaattaa
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integrated database retrieval system
