Sneathiella marina: NBZ79_00030
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Entry
NBZ79_00030 CDS
T08200
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snea03032
]
NBZ79_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
snea03400
]
NBZ79_00030 (gyrB)
Enzymes [BR:
snea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NBZ79_00030 (gyrB)
DNA replication proteins [BR:
snea03032
]
Prokaryotic type
DNA Topoisomerases
NBZ79_00030 (gyrB)
DNA repair and recombination proteins [BR:
snea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NBZ79_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
UFD1
Motif
Other DBs
NCBI-ProteinID:
USG61362
LinkDB
All DBs
Position
6128..8557
Genome browser
AA seq
809 aa
AA seq
DB search
MSNEQDQSNAEDYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEAL
AGYCDLVFVALNPDGSVTVRDNGRGIPVDIHEEEGVSAAEVIMTQLHAGGKFDQNSYKVS
GGLHGVGVSVVNALSTRLDMKIWRNEQEHTLSFEHGEPVGSLEITGEAAGKSGTEITFTP
SPETFTNIKFEFSTLEHRLRELAFLNSGVYIQINDFRSAEPTTTDLHYEGGISSFVEYLD
RSKSPLIGQTIDFSTEREGITVEASLQWNDSYHENVLCFTNNIPQRDGGTHLAGFRAALT
RTINQYATSSGLSKKEKAVITGDDAREGLTCVVSVKVPDPKFSSQTKDKLVSSEVRPIVE
SSVFEALTQWFEEHPNDAKTVISKVFEAAAAREAARKARELTRRKGALDISSLPGKLADC
QSKDPEVSELFLVEGDSAGGSAKQGRDRHNQAVLPLRGKILNVERARFDRMLSSTEIGTM
ITALGTGIGPEEFNIEKARYHKIIIMTDADVDGSHIRTLLLTFFYRQMPELVEKGYLYIA
QPPLYKVERGKSSVYLKDQQAMDDYLIEQGIEDVVLELSSGEQRSGADLLELITRARQAR
DLIDAIARLQNRSVVEQVAIAGALNDDLLSDPEKGPEAANFVAKRLDAISSETERGWVGE
ILPDHSLKFSREVRGVTEVQLVDSNLIHSAEARQLNSMKDELQAIYAAASTFVHKDKRET
INSPLELMDKVLTLGKRGIKMQRYKGLGEMNPDQLWETTLDQDARTLLQVRVNHGDEADQ
VFSTLMGDVVEPRRNFIQDNALKVGFLDV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgagcaagaccaaagcaatgcagaagattacggagctgattcaatcaaggtc
ctgaaaggccttgatgctgttcgcaaacgccccggcatgtatattggcgataccgacgat
ggatcgggtttgcatcatatggtgtatgaagttgttgacaacgcaatcgatgaagctctc
gctggttattgtgaccttgtattcgtcgccttaaatccggacggttctgtgactgtacgg
gacaatggccgcggaattcctgtagatattcatgaagaagagggtgtttcggctgcggaa
gtgatcatgacccagcttcacgccggcggcaagtttgatcagaactcgtataaagtatct
ggtggtcttcacggtgttggcgtttccgtggttaatgccttgtccacccgtctcgatatg
aaaatctggcgcaatgaacaagagcatacgctgagtttcgagcatggcgagcctgtggga
tcgttggaaattacgggcgaagcggcaggcaagtccggaacggaaatcactttcacacca
tcaccggaaacttttaccaatattaagttcgagttttccacacttgagcatcgtttgcgt
gagctggcctttctaaattcaggcgtctatatccagataaatgatttccggtccgccgaa
ccgacgacaacggatttacattatgaagggggtatttcctctttcgtagaatatcttgat
cgatcgaaatcacccttaattggccaaaccattgatttcagcaccgagcgcgaaggcatc
accgtcgaggcctctttgcaatggaacgacagctatcatgaaaacgttctatgtttcacc
aataatatcccgcaacgtgacggcggaacccatttggcggggtttcgggcggccttgacc
cgcaccatcaaccaatatgcgacatccagcgggttatcaaaaaaggaaaaagccgtcatt
acgggcgacgatgcccgcgaagggcttacctgcgtcgtatcggtaaaagtgccagatcca
aaattctcgtcacaaaccaaagacaagctggtgtcgagcgaagtccggccaattgttgaa
agcagtgtatttgaggcactgacacaatggtttgaagaacaccccaacgacgcaaagacg
gttatttcaaaagtatttgaagcggcagcagcgcgggaagcggcccgaaaggcgcgcgag
cttacgcggcgaaaaggcgcattggatatttccagcctgcccggcaaacttgctgattgc
cagtcgaaggacccggaagtctcggaacttttcctggtggaaggggacagtgcgggcggc
tccgccaaacagggccgggaccgtcacaatcaggcggtcttgccgttgagaggtaaaatc
ctcaatgttgagcgggcgcgatttgatcgcatgttatcgtcaacagaaatcggaacgatg
attacggctttaggcacaggtattggaccggaagagtttaatattgaaaaggcacgatac
cacaagattatcatcatgacggatgcggatgtcgacgggtctcatatccggacgcttttg
ttgactttcttctaccgtcagatgccggaacttgtcgaaaagggatatctttatattgca
cagccgccgctgtacaaggtcgaacgtggcaagtcttctgtgtatctaaaagaccagcag
gcaatggatgattacctgatcgaacaaggcatagaagacgtcgtgcttgaactctcctca
ggagagcaacgtagtggcgcagacttgttggagctcataacccgggcacgacaggcgagg
gatctaattgatgccattgcgcgcctgcagaaccgatctgttgtcgaacaggttgccatc
gctggcgcattgaacgacgatcttctgagtgatcctgaaaaagggcccgaagccgccaat
tttgttgccaaacgcttggacgccatttcctcagagaccgaacgcggctgggttggggaa
attctgcccgatcatagccttaaattcagtcgcgaggtccgcggggtcacggaagtccag
ttggtagacagtaatctgatccattcagcagaagcacgccagcttaactcgatgaaggat
gaattacaggcaatttacgcggcagcgtcaactttcgttcataaagataaacgagaaacc
atcaattccccgcttgagctaatggacaaggtgctaacacttggaaaacgtggcataaaa
atgcagcgctataaaggtctaggcgaaatgaaccctgaccagttatgggaaacaaccctc
gaccaggatgcccgaaccctgctgcaagtgcgggtaaatcacggcgatgaggcagaccag
gttttctccacacttatgggtgacgttgtagagccgcggcggaactttatccaggataat
gcgttgaaagtcggatttcttgacgtctag
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