Sneathiella marina: NBZ79_00480
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Entry
NBZ79_00480 CDS
T08200
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snea03032
]
NBZ79_00480 (ihfB)
03036 Chromosome and associated proteins [BR:
snea03036
]
NBZ79_00480 (ihfB)
03400 DNA repair and recombination proteins [BR:
snea03400
]
NBZ79_00480 (ihfB)
DNA replication proteins [BR:
snea03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NBZ79_00480 (ihfB)
Chromosome and associated proteins [BR:
snea03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NBZ79_00480 (ihfB)
DNA repair and recombination proteins [BR:
snea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NBZ79_00480 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Lmo2446-like_N
DUF7336
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
USG61451
UniProt:
A0ABY4W9X7
LinkDB
All DBs
Position
complement(87248..87532)
Genome browser
AA seq
94 aa
AA seq
DB search
MIKSELITLIAENNPHLYQRDVERIVTTIFDEISGALSRGDRVELRGFGAFSTKERAERI
GRNPRTGEAVKVDKKYVPYFKCGKELRDRLNADS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactcatcacgctcattgcggaaaacaatccccatctataccaacgc
gatgtcgagcgcattgtcaccaccatttttgacgagatttcaggcgctttgtctcgcggt
gatcgggttgagcttcgcggatttggtgctttttcaacgaaagagcgggcggaacggatc
gggcggaacccgcgaacaggcgaagctgttaaagtggacaaaaaatatgttccatatttc
aagtgcggaaaagagctacgtgatcggttgaatgcagattcttaa
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