Sneathiella marina: NBZ79_02330
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Entry
NBZ79_02330 CDS
T08200
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snea
Sneathiella marina
Pathway
snea00061
Fatty acid biosynthesis
snea00071
Fatty acid degradation
snea01100
Metabolic pathways
snea01212
Fatty acid metabolism
snea02024
Quorum sensing
snea04146
Peroxisome
Module
snea_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NBZ79_02330
00071 Fatty acid degradation
NBZ79_02330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NBZ79_02330
09145 Cellular community - prokaryotes
02024 Quorum sensing
NBZ79_02330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snea01004
]
NBZ79_02330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snea04147
]
NBZ79_02330
Enzymes [BR:
snea01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NBZ79_02330
Lipid biosynthesis proteins [BR:
snea01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NBZ79_02330
Exosome [BR:
snea04147
]
Exosomal proteins
Exosomal proteins of breast milk
NBZ79_02330
Exosomal proteins of breast cancer cells
NBZ79_02330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
NoBody
Motif
Other DBs
NCBI-ProteinID:
USG61809
LinkDB
All DBs
Position
complement(465397..467115)
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AA seq
572 aa
AA seq
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MSDFLWEKSYPPGVKWEIDIAEKPVYALLDEAVKKWPDNYAIDFMDKRIRYAELDDMINR
AAKGFVELGVKKGVHVGLYLPNTPHYVVCFFGILKAGGTVVNYSPLDAERELRHKIEDSH
TDFIVTLDLEVLYPNIGKMLESTRLKKVIVGCLKEVLPFPKNLLYPLVKSKDIAKIPNDD
QHVTFKQLLANDGRIDVVPVPDPADTIAVLQYTGGTTGLPKGAMLTHKNLIAACQQLRAM
QESDDPILTDGTEKVLAVLPLFHIYALTVIMNYGIAGGAEIILHPKFDLDEVMKDLNKKK
PTIFPGVPTMYMAIANHPDIANYDLSSLKFCASGGAPLPVEVQEQFQRVTGCLLLEGWGM
TETSPSGTSTPLTDKRVPGAAGVPVPGVEITIFDVDDKSKIMPTGEIGEIAIKGPNVMKG
YWNKPEATEESFIGDFFLTGDTGYLDEDGYMHIVDRTKDMITSGGFNVYPRIIEEAVFEH
PFVEEVTVVGIPDDYRGEAAKAFIKLTPEGKEFDLDELREFLADKLGKHELPAAVEFRPE
LPKTLVGKLSKKELVEEEKLKYEERKKAEASS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttttgtgggagaaatcttacccgcctggggtaaaatgggaaatcgatatc
gcagaaaagccggtctacgcgcttttagatgaagccgttaaaaaatggccagataattat
gccattgattttatggacaagcgaattcgctatgcagaattggatgacatgattaaccgg
gccgctaagggatttgttgaacttggtgttaaaaagggtgtccatgtcggtttgtatttg
ccaaacacgcctcattacgttgtctgttttttcggaatcttgaaggctggtggaacagtc
gttaattattcaccgttggatgcggaacgagagttacgtcataaaatcgaagatagtcat
accgactttattgtcactctcgatcttgaagtactttatccgaatatcggcaagatgctc
gaaagcacacgcctgaagaaagtcattgtcggttgcttgaaagaagtattgccgttccca
aaaaacctgctctatccgttggtaaaaagcaaggatatcgccaaaatacccaacgatgac
cagcatgtaacctttaagcaattgcttgccaacgacggccggatcgatgttgttccagtg
cctgatcctgcagataccattgcggttttgcaatatacaggtggcacgacgggtttgccg
aaaggcgccatgctaacacataagaacctcatcgctgcatgtcagcagctcagagccatg
caggaaagcgatgacccgatattgaccgatggcacggaaaaagtgttagccgttttacct
ctattccatatctatgctcttactgtgataatgaactatggcatcgcgggaggggcggaa
attatccttcatcctaaattcgatcttgatgaagtaatgaaggatttaaacaagaagaag
cccactatttttccgggcgtccctaccatgtatatggcgatcgccaaccatcccgatatt
gccaactatgacttatcctccctgaagttctgtgcatctggcggcgcgccgctccctgta
gaagttcaggagcaatttcagcgcgtaaccggttgtttattgttggaaggatggggaatg
acagaaacttctccgtccggcacctcaactccgttaaccgacaaaagggtacctggcgcc
gccggcgtaccagtcccgggtgtggaaattactattttcgatgtcgacgataaatcgaaa
atcatgccgacgggtgaaattggcgagattgccataaagggcccaaatgtcatgaagggc
tattggaacaagccggaggcaacagaagaaagttttatcggcgacttcttcctgaccggc
gataccgggtatctcgatgaagatggctatatgcatatcgttgatcgcaccaaggacatg
attacctccggcggatttaacgtatatcctcgaattattgaagaagctgtgtttgaacac
cccttcgttgaagaagtaaccgttgtcggcatccccgatgattatcgcggggaagctgcg
aaagccttcatcaagctcacacctgaaggtaaggaattcgatctggatgagctccgcgag
tttttagcagacaaacttggtaagcacgagcttcctgctgccgttgaattccgtcctgag
ctaccgaaaacactcgtaggaaaactatcgaaaaaggaattggtggaagaagaaaaacta
aaatatgaagaacgcaagaaagccgaagcctcttcataa
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