Sneathiella marina: NBZ79_02420
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Entry
NBZ79_02420 CDS
T08200
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
snea
Sneathiella marina
Pathway
snea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NBZ79_02420 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snea02000
]
NBZ79_02420 (choW)
Transporters [BR:
snea02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NBZ79_02420 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
PsbK
DUF3464
Motif
Other DBs
NCBI-ProteinID:
USG61827
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All DBs
Position
481783..482631
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AA seq
282 aa
AA seq
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MEWLTDHKIPLGNWIRDGVNLLLDHGAWIFDSFSDALAFLIDGMVDIMLWCPPLLLVGLF
ALGAYALHRSWKLSLLIVACLLLVINLGYWEETVRTLGLIIFATLTCVIVGVPLGILAAH
RPRFYTVLRPILDLMQTIPTFVYLIPTMIMFGLGVVPGLISTVIFAIPAPIRLTYLGISG
VPKALVEAGEAFGATRRQILWKIELPHAAPTIMAGVTQCIMLCLSMVVIAAMVGAPGLGV
PVLRALNTVNIAKGFEAGLAIVIIAILLDRVCKQPTQKKEGR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctgactgatcataaaattccgcttgggaattggatccgcgatggcgttaat
cttctcttggaccatggcgcatggatatttgatagcttctctgacgcgctggcattttta
atcgacggcatggtcgacataatgctttggtgccctcctttattgctggttggacttttt
gcactgggtgcttacgcattgcaccgtagctggaaactatcgctgctaatcgttgcgtgt
ctcttgcttgtcatcaatcttggatattgggaagaaacagttcggacactcgggttgatt
attttcgcgacgctcacctgtgttattgtcggtgttccacttggtatattagcagcccat
cgaccaagattttacactgtactcagacccatattggacctgatgcagacgattccaact
tttgtttacttgatcccaacgatgatcatgtttggattaggcgtcgtccccggcctcatt
tcgacagtaatattcgctatcccggcgcccatccgactgacctatttaggaatttctggc
gttcccaaggctttagtcgaagcgggggaggcttttggcgcgacgcggcggcaaatcctg
tggaaaatagagttaccacatgctgctccgaccatcatggcgggcgtcactcaatgcatc
atgttgtgtctgtccatggttgtgatagctgcaatggttggtgcaccgggcctcggagtt
ccggtgttaagggcgttaaatacggtaaatatagcaaagggatttgaagctggattagca
atcgtgatcattgccatattgttggatcgggtatgcaaacaacctacacagaaaaaagaa
ggcaggtaa
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