Sneathiella marina: NBZ79_03210
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Entry
NBZ79_03210 CDS
T08200
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snea
Sneathiella marina
Pathway
snea00061
Fatty acid biosynthesis
snea00071
Fatty acid degradation
snea01100
Metabolic pathways
snea01212
Fatty acid metabolism
snea02024
Quorum sensing
snea04146
Peroxisome
Module
snea_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NBZ79_03210
00071 Fatty acid degradation
NBZ79_03210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NBZ79_03210
09145 Cellular community - prokaryotes
02024 Quorum sensing
NBZ79_03210
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snea01004
]
NBZ79_03210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snea04147
]
NBZ79_03210
Enzymes [BR:
snea01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NBZ79_03210
Lipid biosynthesis proteins [BR:
snea01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NBZ79_03210
Exosome [BR:
snea04147
]
Exosomal proteins
Exosomal proteins of breast milk
NBZ79_03210
Exosomal proteins of breast cancer cells
NBZ79_03210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
USG61982
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All DBs
Position
complement(654005..655627)
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AA seq
540 aa
AA seq
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MDRVWQQHYGDNIPAEIDLQPDMTLMDMFNNACEKFADRDAFSSFGQNRTYAEIQTLARN
FSAYLQNELGIQKGDRIALMTPNCMAFPVAMFGIVGAGAVQVNVNPLYTGRELRHQLQDA
DTETIVLFTGSTPVLAEALEGTPIKNIITLTLDDFHGGGIPSPAAENSLSVTTTLSDAIA
KGAELDFKDPGLTGSDLLFLQYTGGTTGLSKGAALSHSNLVANILQIKAFLGDFISEENE
IVITAIPLYHIFALAVNCLTYVSVGATNVLITNPRDIDGFISEMGKWKFTVFTGVNTLYN
GLSMMPAFKELDFSALKYCLGGGTACQEAVSNRWKEITGMHITEGFGMSETSPVVSVNPL
PAQSFSGTIGIPLSSTDVSIRDEDGRELASGEAGELCIKGPQVMSGYWRQDEANKSAFWS
DGYFRSGDVAVISEDGYVKIVDRMKDMVIVSGFNVYPNEIEAVIAMMDEVAECACIGIPD
DTTGEALKLFVVKKDEDLTTDTIVAYARKNLTAYKVPKQIEFIDEVPKSPVGKILRRELR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtttggcaacaacattacggcgataacataccggcagagattgacctgcag
ccagatatgaccctgatggatatgtttaacaatgcctgtgagaaatttgctgaccgtgac
gctttttccagcttcggacaaaaccgcacttacgcggaaattcaaacattggcgcgcaat
ttttctgcctacctccaaaatgagctgggtattcaaaaaggggatcgtatcgcgctgatg
acgccaaattgcatggcttttcccgtcgccatgttcgggattgtcggtgccggagcggtc
caggtaaatgtcaatccactttataccggtcgtgagttgcgccatcaattacaggatgca
gacacggaaacaattgttctattcaccggatcgacacccgtattggcggaagccctcgaa
ggaacaccgattaaaaacattatcaccctgaccttggatgattttcacggaggtggcatt
cccagtccagcggcggagaacagtctctcggtcacgacaacactgtccgatgcgatcgcc
aagggcgccgagctggactttaaagaccccggattaacgggcagtgatttgctgtttttg
caatataccggtgggaccaccgggttatcaaagggtgcggcactcagccacagcaatctc
gttgccaatattctacagatcaaagcgtttcttggcgattttatatcagaagagaacgag
atcgttatcacggcaattcccctttatcatatcttcgcgttggctgttaactgcctgaca
tatgtcagtgtcggcgccacgaacgttttgattaccaatccgcgtgatattgatggattt
atatccgaaatgggcaaatggaaatttactgtctttaccggtgtgaacaccttgtataat
gggctttccatgatgccggccttcaaggaactggatttctctgcgcttaaatattgcctt
ggcggcggcaccgcatgtcaggaagctgtctccaatcgctggaaagaaatcacgggcatg
catatcactgaagggttcggtatgagcgaaacatcgccggtggtatcggtcaatcctctg
cctgcacaatccttttcagggacgattggaattcccctttcttcgactgacgtatccatc
cgcgatgaagatggtcgagaactggcgtccggagaagcaggtgagctttgcatcaagggg
cctcaggtaatgtcagggtactggcgccaggatgaggcaaacaaatcggcattctggtca
gatggctatttcagatctggcgatgttgctgtcatttccgaagatgggtatgtcaagatt
gtcgatcgcatgaaggatatggtgatcgtatccggcttcaatgtatatcccaatgaaatc
gaagcggttatcgcgatgatggatgaagttgcagaatgcgcctgcataggtattcccgac
gacactacgggcgaagctctcaagctcttcgttgttaaaaaggatgaagacctgacaacg
gataccattgttgcctatgcccgtaaaaacctgacagcctataaggttcccaaacaaatc
gaatttattgatgaggtccctaaaagcccggttggtaaaatcttgcgccgggagttgaga
taa
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