Sneathiella marina: NBZ79_04915
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Entry
NBZ79_04915 CDS
T08200
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
snea
Sneathiella marina
Pathway
snea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NBZ79_04915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snea02000
]
NBZ79_04915
02044 Secretion system [BR:
snea02044
]
NBZ79_04915
Transporters [BR:
snea02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NBZ79_04915
Secretion system [BR:
snea02044
]
Type I secretion system
Adhesin protein transporter
NBZ79_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
Zeta_toxin
nSTAND3
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
USG62319
LinkDB
All DBs
Position
complement(1023689..1026070)
Genome browser
AA seq
793 aa
AA seq
DB search
MTDNKDSSVTDETKTGHMGIKTAQELFAPRDGEQKHVDPATLSANADNLPNSEEKINGNE
TKENWKINLSEVSRADQDALLGCLTTLTKIFDSPRTADSLIYGLPLEDSKLTPQLFVRAA
QRAGISARISNRQLAKIPDVVLPSVVLLTDRRACILLSRKEGLAEVIFSDTGEGSQSIPL
EDLEAMYAGYAILVRPAFKYRVDKDESLTPRKGSWFWGTMWQFWPTYLQVIIAAFLINSF
AIASPLFIMNVYDRVVPNKAIETLWVLAIGVIIVIAFDLLLKSLRSYFVDNAGKRADVLL
SSRIFEQVLNIQVKARPASAGAFANHLREFETLRDFFTSVTVTALVDLPFLGIFLFIIYL
IGGSVVIIPAMAIPVVLLIGLFLQWPMRHAVSKSAEEASMKHGVIIETISALDTVKSMGV
EGHMQKEWERFVGKTAQTSVAARFFAGLGINLSAAAMQLVTVGVVVYGVILMSEPNSAMT
VGALIACTILTGRTMAPLGQIAGLLTRLNQAVVALKGLNTIMALPVERAAEKRHLSRPNI
QGDIEFQNVTFKYPDTDLPALSDISFKIKAGEKVGIIGPVGSGKTTISRLLINLYEPDEG
AVLIDGTDIRQIDPSDIRRSIGTVMQDITLFQATVRQNITMGHPQADDDMILKASQLAGV
HDFVSRHPHGYDLHVGEKGATLSGGQRQSIGLARALLPNPPILMLDEPTSAMDLNSERRF
INRLEGFVADKTLLLVTHRTSLFSLVDRIIVLGNGKIAADGPRDEILKIGQQTKHKAQTV
KATTVQVSGKKDI
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaacaaggatagctctgtgacagatgaaaccaaaactggccacatgggcata
aaaactgctcaagaactgtttgcgcctagagacggagagcaaaaacacgtcgacccagct
accctttcagcgaatgcagataatcttccaaattcagaagaaaaaatcaatggaaatgag
acgaaagaaaattggaaaattaacctatcggaggtcagccgagcagatcaggatgcgtta
cttggctgtcttaccactcttacaaaaatatttgacagcccacgcaccgcagattcattg
atttatgggcttccgctcgaagacagcaaactaacacctcaactttttgtccgcgcggca
caacgtgctggtatcagcgcacgaatatccaatcggcagcttgcaaaaatccctgacgtt
gtcttgccgtctgttgttttgttaacagaccgtcgcgcctgcatactgctgtcgcgcaaa
gaaggccttgccgaagtaattttttcagatactggcgaaggaagccaatccattcctttg
gaagatctggaagccatgtatgcagggtatgccattctagtcaggcccgccttcaaatat
cgggtggataaagatgaaagtcttacaccaaggaaaggatcttggttctgggggactatg
tggcaattttggccaacctatcttcaagttattattgccgcttttttgatcaatagtttt
gctattgcaagccccctatttatcatgaatgtatatgatcgagtagttcctaataaagcc
attgaaacgctctgggtgctagctatcggtgtgatcatcgttattgcatttgacctgctc
ttaaaatcattgcgcagttattttgtcgataatgcgggaaaacgtgctgatgttttactt
tcgagccgaatttttgaacaggttctcaatattcaagttaaagcccgaccagcgtccgcc
ggagcctttgctaatcacttgcgagaatttgaaaccctgcgggatttttttacgtcagta
acagtgacagcacttgttgatcttccttttctcggcatctttctctttattatttacctc
attggagggtcggtcgtcattattccggcaatggcgattccggtagttctactcattggt
ctttttttacaatggccgatgcggcatgccgtatccaaatccgcagaagaggcctccatg
aaacatggagtgatcattgaaaccatctctgcactggatacagtaaagagtatgggcgtc
gaaggtcacatgcaaaaggaatgggaacggtttgttggtaagactgcacaaacgagtgtt
gcagctcgtttcttcgctggtttgggcataaatctttctgcagccgctatgcagctagtt
acagtaggtgtcgtggtttacggtgtaatattgatgagtgaaccgaattcagcgatgacc
gtcggagcattgattgcctgtactatcctgaccggtcgaacaatggctcctctgggccag
attgctggtttgcttacgaggctaaatcaagcagttgtcgccctaaaaggtttgaacacc
attatggccctcccggttgagagagctgcagaaaaacgacatcttagccgccccaatatc
caaggcgacatcgagtttcaaaatgttactttcaaatatccggatacagaccttcccgcg
ttaagcgacatctcgttcaagattaaagctggagaaaaggtggggattattggccctgtt
ggctccggcaaaaccacaatttctcgactgttgatcaatctctatgaaccagatgaaggg
gccgttttaattgatggcacggatattcgccagattgatccgtcagatattcgacggagt
atcggcaccgtcatgcaggacattaccttgttccaggcgactgttcggcaaaacattacc
atggggcatcctcaagccgacgacgacatgattttaaaagcttctcaacttgccggagta
catgattttgttagccggcatccgcatggatatgacctgcatgtgggagaaaaaggtgca
accttgtcaggaggccaaaggcaaagtattggccttgcgcgggcattgctgccaaatccg
cccatacttatgctagatgaaccaacaagtgcaatggacttgaactcagaacggcgtttt
atcaatcgcctggaaggctttgttgcagataaaacactcctgctggtaacccatcggaca
tcccttttttctctcgttgacagaattatcgtgttggggaacggaaagatcgccgcagac
ggtccgcgagacgaaatattgaaaattggacagcaaaccaaacacaaggcgcaaacggtt
aaggcgacgacagtgcaggtatcaggaaagaaggatatctaa
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