Sneathiella marina: NBZ79_06540
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Entry
NBZ79_06540 CDS
T08200
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snea02000
]
NBZ79_06540
Transporters [BR:
snea02000
]
Other transporters
Pores ion channels [TC:
1
]
NBZ79_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
USG62633
LinkDB
All DBs
Position
1365522..1369877
Genome browser
AA seq
1451 aa
AA seq
DB search
MKVVTGKRIASYLAIFAVIFLITAAGVYSFFLTDQGREFVVRQIESRLSDPSGVSISLGE
LSGNLFSEFQLSSLSLLDSEGSWATAEELKVTWSPLDLLIGRLEMEDVSLQSFNMARRPV
SVPDADEGDTLSSFSLPVSVELDQLTVETITLQEPVLGREAHLNLSLKLNTQVNDAIYSE
VKISRLDGNAGSVEGLFSYHPDFRTLAIDVQMREPQGGLIARTLDLPGYPEITASLFGDG
ALNAWRGQIRMSADKVFEGDLAISTRGETQIEIDVQGGGILAEDITTSIPVIDSSYIGVE
AAIAWDTAADELLINSSRIENTNLSVTAKGEIDLVNNVLSGNVKSTLRDPAALNALIAPA
SMESAVVELKMEGTFSAVTLDAIIQVGNTAYGDEIAATEATGTFSSKLDLTELKDIPLNG
SAAIAGITMLPEELDALIGNAVDVDFAGNFEFSNQRFDMKELKIAGVNLSASGQGHYIAS
TGRADATANVKIQDLSRLLPATGSLAVTVDFDGRILEQWFGATIGLQTENLDFQDQALTD
LIGSTASGTAKIELKEELISISEIEANLPAGKIVGDVAIPSSFETLTANLVASLPELSRL
DAFVPTKLAGSGTLTADIDGDMDDPKVSGHIEFENLEAENVAIGRANARYLLEDIFSGPA
GNIAGVVDPDNLNISFSSDVSLPGFERLSLDQLLIHDTDNKISGDLSIPFDSTPFTGQLE
AVLPEIAAFAALADEKISGNAKILVTLENANEEQSVVFDVTSSSLAAPSYSVLVDALRLK
GRSLGSFEDPTVNATIELSNLSVENSKLESVAGSIDGKFSDMNYDFDLEKRAEPVLEMAG
GGSVSSNNDGVQFSLSRLNGEFGGKKIALAQPLLLKREEGGMSIDSFALSVGEGKLTGSA
ALTETSATSNITVLAFPLDLLELVMPDLQITGRLDGEAQLSILETGSTGTFSFAATEIQM
EATEFPNTPTFSSHLDGTIAKDKIEFSADISGLEKTALDMSGTVPVTATFTPLKLHIDYD
KPVKLNILADSDIKALWPVLSLDTQKATGIFTAKADLNGTLSDPEIQGSVTLKNGSYEHT
EYGTVLTNITLDATVKDTETVALDLTASDGRQGTFSSKGSVNISMLDTPKLDLSIRSTNL
QALNLEELQVTTDADITIEGTLAALNVGGSITTTDVEIDIGGEAAPNVVNLKVTEVNRPG
AEADTVSNRTDLDKNILLALDVNMPRRVFIRGRGLDSEWKGEFKITGTAEDPMIEGYISP
VRGQFVFAGKSFVLQEGEIALLGGSSLDPELSLSGRYQNADITATVTIEGPASDPEISFS
SDDGLPEDEVISQVLFGKSTGGLTALEAVQLAEAMATLSGSFGSGGGITGFVRNTLGVDV
LTARTNADTGAAEVSVGKYVNENVYVGVDQGAEAGSTRAKVQIDLTPNLSLETEMGQTSD
SRVGIFWKWDY
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagtgaccggcaaacgaatagccagttatctggcaattttcgcggtgatattt
ctgatcacagcggcaggcgtttattcgtttttcctgactgatcagggcagagaatttgtg
gttcggcaaatagaatcacgcctgagcgatccctccggcgtctccatatccctgggcgag
ttgtcgggaaatcttttttccgaattccagctgtcttccctttcactcctggattcagaa
ggcagctgggcaacagcagaagagctgaaagtaacctggtcgccactggatttgttgatc
ggcaggctggaaatggaagatgtttccctacagtctttcaacatggcccgcagacctgtt
tccgttcctgatgcagatgaaggggacactctgtcctccttctcacttcccgtttccgtc
gagctcgaccagttgacagtagagaccataacacttcaagagcccgtacttggccgggaa
gcacacttaaatctttccctaaagctcaatacgcaagtgaatgacgcgatttatagcgag
gtgaaaatttcacggctggatggcaacgcgggttcggtggaaggccttttctcctatcat
cctgattttcgaacgctggcgattgacgtacaaatgcgcgagccacaaggtggtttgatt
gcccggactctggatttgcctggatatcctgaaatcacggcttcactgttcggtgatggc
gccctcaatgcctggcgcgggcaaatccgcatgagcgcggataaagtatttgaaggcgac
cttgcaatcagtacacgcggggaaacacaaatagagatcgatgtgcaaggcggtggcatt
cttgcagaggatataacaacctccatccccgtgatcgacagctcctacattggtgttgag
gctgccattgcctgggatacggcagcggacgagctcctgattaactcatcaaggatagag
aatacaaacctatcggttaccgcaaagggtgaaatcgatcttgtaaataatgtgctgagc
ggtaacgtaaagtccaccttaagggacccggcggctcttaatgccctcatcgcaccagct
tccatggaaagtgctgttgttgaattgaagatggaggggaccttcagcgcagtaactttg
gatgctattattcaagtcggtaacacggcctatggtgatgaaatagctgcgactgaagcc
accggcactttctcgtcgaagctcgatctaacagagctaaaggatattcctttaaatggg
tctgcggcgattgccggaattaccatgcttcccgaagaacttgatgccctgatagggaac
gccgtggatgttgattttgcgggaaacttcgaattttcaaatcaaagatttgatatgaag
gagttaaaaattgcgggtgtaaatctttccgcctctggacaagggcattatatcgcatca
accgggcgggctgacgcgaccgcaaatgttaaaatccaggatctatccagacttttgcct
gcgacaggcagtctggcggtaacagtcgactttgacgggaggatcctggaacagtggttt
ggcgcgacaattggattgcagactgaaaatctcgattttcaggatcaggcgctcacggat
ctgattggctctacggcctccgggacggcaaagattgaattgaaagaggagctcatcagc
atctctgaaattgaggctaatctaccggcgggcaagattgtcggagacgttgcaatcccc
tcgtcttttgaaactctaaccgccaatctggtcgcatccttgccggaactatctcgcctt
gatgcctttgtgcccacaaaactggcgggttccggaacactcaccgctgatattgacggg
gatatggatgatccaaaggtgagcggacatattgaatttgaaaatctggaagctgaaaat
gtcgccatagggcgcgccaatgcgcgctatctcttggaggatattttttcaggcccagcc
ggtaatattgccggcgtggtcgatccggataatctcaatatcagtttttcaagcgatgtg
agtctcccgggatttgagcgtctgagcctggatcagcttttgatccatgataccgataat
aagatttctggtgatttatcaatccccttcgatagcactccctttaccggccagcttgag
gctgtgctgccggaaattgctgcatttgcagcgctggcagatgaaaaaatttcaggcaac
gcgaagattttggtgacattggaaaatgcaaatgaagagcaaagcgttgtatttgatgtc
acatcatcgtccctggctgcgccgagctactctgttttggtcgacgcactccgcttaaag
gggagatcgcttggaagttttgaagatccaaccgtgaacgcaacaattgagctcagcaat
ctttcagttgaaaactcaaaactggaaagcgttgcaggttccatcgacggtaaattttca
gacatgaattatgacttcgatttggagaaacgagcggaaccagttttggaaatggcaggc
ggtggatctgtttccagcaataatgatggtgttcaattttcactatctcgtttaaacggc
gaattcggaggtaagaagatcgcgcttgctcagccgttgttattgaaacgagaggagggc
ggtatgagcatcgatagctttgctctatctgttggcgagggaaagttgacgggctctgcc
gcacttaccgaaacgtccgccacaagcaatattactgttcttgcctttccccttgattta
ctggagctggttatgccggacctgcagattacaggtcgccttgatggggaggcacagctg
tctattctggaaacaggcagcacaggtacattttcatttgccgcgacagaaatacaaatg
gaagccacggaattcccaaatacgccgaccttttccagccatttggacgggacgatcgcg
aaggacaaaatagaattttcagctgatatttccggcctggaaaaaacggctcttgatatg
tccggaactgtcccggttaccgcaacctttacacctttgaagttacatatagattatgat
aaaccggttaaattaaatatattggccgatagcgatatcaaagccttatggcctgttctt
tcattggatactcagaaggctacgggaatatttacagcaaaagctgacctgaacgggact
ttgtctgacccggaaatacaaggctccgtaaccttgaagaatggcagttatgagcatacg
gaatatggcaccgttttaacaaatatcacgctggatgccacggtgaaagatacagaaacc
gtggccctcgacctgacagcttccgatgggcgccaggggaccttctcgtccaagggatct
gtcaatatatcgatgcttgatacgccaaaactggatctgtcgatccgttcaacaaacctg
caggcattgaacctggaagaacttcaagtgacaaccgacgccgatattaccatagaggga
acgctggcggcgttgaatgtcggcgggagtataaccacaaccgatgttgagattgatatc
ggcggtgaagctgcgcccaatgtggtgaatttgaaagtgaccgaagtcaaccgtcccgga
gctgaggcagacactgtttcgaacaggacggatttggataagaacattttgctggcgctt
gacgtgaatatgccacgacgcgtctttatccggggtcgcggactggattccgaatggaaa
ggggagtttaaaattaccggcaccgccgaggacccgatgattgagggatatatcagcccc
gtgcgcggacagttcgtttttgcgggaaagagtttcgttttgcaagagggtgaaattgcg
ctgttgggaggcagcagccttgacccggagctgtctctgtccggtcgatatcaaaatgcg
gatattacggcaacagtgacaatcgaggggccggcctccgatcctgaaattagtttttcg
tcagatgacgggttgccggaggatgaggtgatttcacaagtgttattcggaaaatctacc
ggcggattgacggcgctcgaggcggttcaacttgccgaagccatggcgacgctttccggc
agttttggctctggcggcgggataaccgggtttgtgcgcaatacgctgggtgtggatgtc
ctcacggcgaggacaaatgccgacaccggtgccgccgaagtcagcgttggaaaatacgtc
aatgaaaatgtttatgtgggtgtcgatcagggggcggaagctggcagcacgcgcgcaaaa
gtacagattgatctgaccccaaacctctctcttgaaacggagatggggcagacctcggac
agccgcgtcggcattttctggaaatgggattattag
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