Sneathiella marina: NBZ79_06680
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Entry
NBZ79_06680 CDS
T08200
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
snea
Sneathiella marina
Pathway
snea00521
Streptomycin biosynthesis
snea00523
Polyketide sugar unit biosynthesis
snea00541
Biosynthesis of various nucleotide sugars
snea01100
Metabolic pathways
snea01110
Biosynthesis of secondary metabolites
snea01250
Biosynthesis of nucleotide sugars
Module
snea_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NBZ79_06680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NBZ79_06680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NBZ79_06680 (rfbC)
Enzymes [BR:
snea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NBZ79_06680 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
MAAL_N
Motif
Other DBs
NCBI-ProteinID:
USG62661
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All DBs
Position
1396388..1396957
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AA seq
189 aa
AA seq
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MEIEDTAIADVKILSPKKFGDHRGFFSEVWNERTLADAGLDLRFVQDNHALSAEAGTLRG
LHYQLDPAAQGKLVRVVRGAVLDVAVDIRAGSPTFGQHVAVELSADNWRQLWVPRGFAHG
YCTLQPNTELVYKVTDYYSPDHDCGIFWNDPALGIKWPVAPEKAILSEKDTVLPRLQDQT
RLFDFEGKT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaagacacagccatagcggatgtaaagattctaagcccgaaaaaattcggg
gatcatcgcgggtttttctccgaggtctggaatgaacggacattggcggatgccggactg
gaccttcggtttgtacaggacaatcatgctttgagcgctgaggcaggcacattgcggggg
ttgcattatcagctggacccggcggcgcagggcaagctggtccgtgttgttcgcggtgct
gtcctggatgtggcggtggatatccgggccggatccccgacttttggccagcatgtggcg
gttgagctgtcggcggataactggcggcagctttgggtgccgcgcggatttgcccatgga
tactgcactttgcagccgaacactgaactggtttacaaggtcacggattactatagcccg
gaccatgattgcggtattttctggaatgaccctgccttggggatcaagtggcctgtggca
ccggaaaaggcgatcctgtccgaaaaagatacggttttgccccggctgcaagatcaaaca
agattattcgatttcgagggaaagacatga
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