Sneathiella marina: NBZ79_06685
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Entry
NBZ79_06685 CDS
T08200
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
snea
Sneathiella marina
Pathway
snea00521
Streptomycin biosynthesis
snea00523
Polyketide sugar unit biosynthesis
snea00525
Acarbose and validamycin biosynthesis
snea00541
Biosynthesis of various nucleotide sugars
snea01100
Metabolic pathways
snea01110
Biosynthesis of secondary metabolites
snea01250
Biosynthesis of nucleotide sugars
Module
snea_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NBZ79_06685 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NBZ79_06685 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NBZ79_06685 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NBZ79_06685 (rfbB)
00525 Acarbose and validamycin biosynthesis
NBZ79_06685 (rfbB)
Enzymes [BR:
snea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NBZ79_06685 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
DAO
Sacchrp_dh_NADP
NAD_binding_8
DUF4170
TrkA_N
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
USG62662
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All DBs
Position
1396954..1398009
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AA seq
351 aa
AA seq
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MTVFVTGGAGFIGSALARDLVSQGEQDVVIIDKLTYAGSVESLKPVSNSPHYHFSKTDIC
DRDAIGALFAKYKPTAVYHLAAESHVDRSIDGPADFVQTNLVGTFTMLDAAYHYWRDLPE
EGQQNFRFLHVSTDEVYGELGATGEFSETSAYDPNSPYSASKAGSDHLARAWHRTYGLPV
LVTNCSNNYGPYQFPEKLLPVVILNALQGKELPVYGKGENIRDWLYVEDHASALQQVVAE
GVVGETYMIGGRAEQTNIHMVRAICRIMDRKFPDKAPHEDLIRYVTDRPGHDARYAVDCT
KIEKELGWAQSLNLETGLEKTVDWYLDNLDWVRAVSEDYTQERLGLGTEKT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttttgtaacaggtggtgccggatttatcggctcggcgttggcccgcgatctg
gtcagtcagggtgaacaggatgtggtgattatcgacaagctgacatatgccggcagtgtc
gagagcctgaaacccgtcagcaacagcccgcactatcatttctctaagacggatatttgc
gaccgcgacgccattggcgcgctgttcgcaaaatacaaacccacggcggtgtatcatctg
gccgcagaatcccatgtggaccggtccattgacggcccggcggattttgtccagaccaac
ctggtcggcaccttcaccatgctggatgcggcatatcattactggcgcgacctgcccgaa
gagggtcagcagaatttccgtttcctgcatgtctcgaccgatgaggtttacggggaactg
ggcgcaacaggcgagttttcggaaaccagtgcctatgaccccaactctccgtattcggcc
agcaaggcgggatcagaccatctggcgcgcgcctggcaccgaacctatggattaccggtg
ctggtcaccaattgctccaacaattatggcccctatcagtttcccgaaaagctgttgccg
gttgtcatcctgaatgccttgcagggcaaggagctgccggtttatggcaagggcgagaat
atccgggactggctgtatgtggaggatcacgcgagcgccctgcaacaggtggtggcggag
ggtgttgttggcgagacctatatgatcggcggccgggccgagcaaaccaatatccacatg
gtccgggccatttgccggatcatggacaggaaattcccggataaagccccccatgaggac
ctgatccgctatgtaacagaccgtccggggcatgacgcccgctatgccgtcgactgcacg
aaaatagagaaggaactgggctgggcgcaatcgctcaacctggagacagggcttgaaaag
actgtcgactggtacctggacaatctcgactgggtccgggccgtgtccgaagattacacg
caggaacgcttgggactgggcactgaaaaaacatga
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