Sneathiella marina: NBZ79_06985
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Entry
NBZ79_06985 CDS
T08200
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snea03021
]
NBZ79_06985 (rpoH)
Transcription machinery [BR:
snea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NBZ79_06985 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_11
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
USG62720
LinkDB
All DBs
Position
complement(1457969..1458847)
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AA seq
292 aa
AA seq
DB search
MSSTSLPVLTPEGGLSRYLQEIRKFPMLEASEEYMLAKAWKDHEDTDAAHQMVTSHLRLV
AKIAMGYRGYGLPVAELISEGNVGMMQAVKRFEPEKGFRLSTYAMWWIRAAIQEYILRTW
SLVKMGTTAAQKKLFFNLRKIKGQIEAIDEGDMTAEQVKTISTKLSVSEEEVVNMNRRLT
APDHSLNAPMRAESEGEWMDWLEDESPNQETTFADNEELQSRRVMLGQAMECLNEREQHI
LTERRLKDEPQTLEDLSQHYNISRERVRQIEVRAFEKLQRAMKAKVMEERLN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagttctacatctttaccagtcttaactccagaaggcggattatcccgctatttacaa
gaaattcgcaaattccccatgttggaagccagcgaagaatatatgctggcaaaagcttgg
aaggatcatgaagataccgacgctgctcatcaaatggtgaccagccatcttcgtctcgtc
gcaaaaattgccatgggctaccgggggtacggactgccggtcgctgagttgatctcagag
ggtaatgtcggcatgatgcaggctgtaaagcggtttgagccggaaaaaggcttcaggctg
tcaacttatgccatgtggtggatccgggctgctattcaggaatatattctgcgcacctgg
tctttggttaaaatgggaacgacggctgcccagaaaaagcttttctttaacctccggaaa
atcaaggggcagatcgaagccattgacgaaggtgatatgactgctgagcaggtgaaaaca
atttctacgaagctcagcgtttctgaagaagaagttgtcaatatgaaccgccgtcttacg
gcacctgatcatagcttaaacgctcctatgcgtgctgaaagcgaaggcgaatggatggat
tggcttgaggatgaaagccccaaccaggaaacaacctttgctgataatgaggaattgcaa
agccgacgggtcatgctcggacaggcaatggaatgcctgaatgagcgggaacagcatatt
ctaacggagcggcgccttaaagacgagccgcagacattggaagatctgagccagcattac
aatatcagtcgcgagcgtgtacgccagattgaagtaagagcttttgaaaagctgcaacgt
gccatgaaagcaaaagtaatggaagagcggctgaactaa
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