Sneathiella marina: NBZ79_11610
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Entry
NBZ79_11610 CDS
T08200
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snea01011
]
NBZ79_11610
Enzymes [BR:
snea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NBZ79_11610
Peptidoglycan biosynthesis and degradation proteins [BR:
snea01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NBZ79_11610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-ProteinID:
USG59823
LinkDB
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Position
2449792..2451975
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AA seq
727 aa
AA seq
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MNKTIALGVLVASLTYSPSIVGATGKPVILQEDTQIDRTTAVLATEPGRRNFIPTPRQKP
EIGDLALLNVSSVPVPKIRPVGIALPPHPLATGLLSKKDLNIYKQAIALASERKWKKARL
MARRADYKLPAKIIDWRWMTAYRNRASFDQISNFIDANPDWPRQTTLQRRAEEALVDPVS
ADRTISWFSSREPLTGIGMLRYGEALIEKGQLVKGQNLVRRAWRVGNFPKDLERATLKNF
NLLLTVQDHDSRLEHLLWERKATAATRMLPYASKGKSKLAVARIQLMTKRGNVDHAVRSV
PRELQADPGLIFERAKWRRQKSLHEESQELLLQMDATVPRAEKWWRERHLQARKLLAKGH
ITDAYKLVSQHGLAQGGDFATAEWLSGWISLQFLGDPAIARQHFVRMYENVGYPISRARA
AYWIGRADTSARENALAQYWYEVAAQHYTTYYGQMAHFELGKSQLPMIPKLTGINPHVKK
IYDADERTLIIRHLTELNKPKWTRYFLLEMAETAKTADAFKYLAKLANDIGRPDYAISVA
KRASQRGTELTEINWPTNGAQADKTPIEKALVFAIMRQESAFASDAISSAGARGLMQLMP
ATAKHVSRSLKVTYSKFQLTEDPDYNALLGSSYLSGLVDEFNGSYVLAIASYNAGPRNVR
KWIDTWGDPRTGEIDMIDWIEFIPFTETRNYVQRVIENLQIYRQRLAVSQNEKLTIYQDL
NRGLATH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccatagcacttggcgtccttgtcgccagcttgacatattcgccatccatt
gtcggggcgacgggaaaacctgtgatccttcaggaagatacacaaattgatcgaacaacc
gcagtgttggcgacggagcctggccgacgtaatttcattcctacgccacgtcaaaaaccg
gaaattggggacttggctcttttaaatgtttcctctgtaccggtcccgaaaatacgtccg
gttggtattgccctgccgcctcatccacttgcaacaggattgctcagcaagaaagatctg
aatatttataaacaggctattgctttggcttccgaacgaaaatggaagaaagctcggctc
atggctcgacgagcagactataaactgccagcgaaaattatcgattggcggtggatgacc
gcttatcgcaacagagcaagcttcgaccagatatccaatttcattgatgccaatcccgat
tggccacggcaaacgacgttacaaagacgggctgaagaagcattagttgatcccgtatct
gcggatcgaacaatttcttggttcagctcacgcgaaccgctcaccggaataggaatgctt
cgttatggtgaagcccttatagaaaaagggcaattagtaaaaggccaaaaccttgtcagg
cgcgcctggcgtgtgggaaattttccaaaagacctcgagcgggcgacattgaaaaatttt
aatctgctcctcactgtccaggatcatgacagtcggctcgagcatctcttgtgggagaga
aaggctacagcggcaacgcgcatgcttccttatgcaagcaagggcaaaagcaaacttgcc
gttgcacgcatccagctgatgactaaaagaggaaatgttgatcacgcagtccgcagcgtt
cccagagagttgcaggctgacccaggcctgatttttgaacgggcgaagtggcgccgacag
aaatccctgcatgaggaaagccaagaactccttctgcaaatggatgcgactgtaccccgg
gctgaaaaatggtggcgagaacggcatttacaagcgcgtaagctacttgccaaaggtcac
attacagatgcctataaactggtgagtcagcatggattggcgcaaggcggcgatttcgcc
actgcggaatggctgtccgggtggatttctttacaattcctcggagatccggctatcgca
cgacagcatttcgttcgaatgtatgaaaatgttggttacccaatcagccgtgctcgtgcc
gcctattggattggccgcgctgatacatcagcccgcgaaaacgcgcttgcccaatattgg
tatgaagtcgcggcacagcattataccacctattatgggcaaatggcgcatttcgaactg
ggaaaaagccagttacccatgatacccaaacttaccggaatcaatccacacgtgaagaag
atatatgacgccgatgaacgcacattaataattcggcatctgacggaattgaacaaacca
aaatggacaagatattttcttttggagatggcagagactgcgaaaacagctgatgcattt
aaatatttggcgaaattggcaaatgatatcggtcgacccgactatgctatctccgtcgct
aaacgagcttctcaaagagggacagaactaacagaaatcaattggccgacaaatggcgcg
caagcagataagacacccatcgaaaaggcactggtttttgctattatgcgccaggagagc
gccttcgcctctgatgctatatcaagcgcaggggcccggggacttatgcagctgatgccc
gcgacagcaaaacatgtttcgcgatccctgaaggtcacctattcaaaatttcagctgact
gaggaccccgattacaatgcattgctaggtagctcctacctttccgggttggttgatgag
ttcaatggatcctatgttctggctatcgcgtcctataacgctggcccgcgcaatgttcgc
aaatggatcgacacctggggcgatccgcgcactggcgaaatcgacatgatagactggatt
gaatttattccctttacggaaacaaggaattacgttcaacgggtcattgagaatttgcaa
atttatcgccagcgattggccgtaagccagaacgaaaagctgaccatttatcaggatctc
aatcgcggtcttgcgacacactaa
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