Sneathiella marina: NBZ79_11820
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Entry
NBZ79_11820 CDS
T08200
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
snea
Sneathiella marina
Pathway
snea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NBZ79_11820 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snea03400
]
NBZ79_11820 (uvrA)
DNA repair and recombination proteins [BR:
snea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NBZ79_11820 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NBZ79_11820 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
USG59864
LinkDB
All DBs
Position
2491078..2493972
Genome browser
AA seq
964 aa
AA seq
DB search
MQKTLSIRGAREHNLQNVNIDIPRDKLVVITGMSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVDHIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARIGVPY
SPATGLPIESQTVSQMVDQVMAKGADKRLYLMAPIVRGRKGEYRKEFLDLRKRGFQRVKV
DGEIYDIEDIPELDKQLKHHIDVVVDRVVINEDIQGRLADSIETALELADGLFVVEDADS
AERFIFSAKFACPVSGFTIEEIEPRIFSFNNPYGACTACGGLGTEMYFDPDQIVPDVTLT
LRGGAIAPWSRSQTPAPYYMQTLEALGKHYGFTTTEPWEEIAEESRKAILFGTGDEKIQI
TFDDGMRTYKTNKPFEGVIPNIERRWRETDSSWVREDLEKYQDKTNCSKCSGHRLKEEAL
AIKIDDHHIGDVVSKSILDARKWFEGLSKVLSPKDLAIGERVLKEINERLGFLVDVGLEY
LTLSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLKTLINLRDQ
GNSVIVVEHDEEAIMTADHVIDMGPRAGSHGGKLIAQGTPKEVMEADGSVTGKYLSGELE
VPLPAVRRKIQESRQLKIIGARHNNLKRVNVNIPLGTFTCVTGVSGGGKSSLIIETLYKA
IAKKLNNNRNHPGPHDRIEGIEWLDKIVDIDQSPIGRTPRSNPATYTGAFTPIREWFAGL
PDAKARGYKSGRFSFNVKGGRCEACKGDGVIKIEMHFLPDVYVQCDVCKGDRYNRETLEI
KFKDKSITDVLNMTVDEAAVFFKAVPNVREKFETLQQVGLGYIHVGQQATTLSGGEAQRV
KLAKELSRRATGRTLYILDEPTTGLHFEDVRKLMEVLQALVNTGNSVLVIEHNLEVIKTA
DWVVDMGPDGGDAGGYLVAEGTPEEVAKVKESYTGQYLKTILAKRPAVKQAPSKSSKSSK
TRAA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgctcagcatacgcggcgcacgcgaacataacttgcaaaatgtaaatatc
gatattccgcgcgacaaattggtcgttattaccggaatgtccggttcgggaaaatcctcc
ctcgcctttgacaccatctatgctgaaggccaacgacggtatgttgaaagcctttcggct
tacgcacggcagttccttgaaatgatgcaaaagcccgatgtcgatcatattgacggactc
agtccggcaatttccatcgagcagaaaacaacctcgaaaaacccgcgatcaacggtggga
accgtcacggaaatctatgattaccttagattgctttatgcccggatcggcgtgccttac
tcacccgcaacaggactacccattgaaagccagacggtcagtcaaatggtcgaccaggtt
atggcaaaaggtgccgacaaaagattgtatcttatggcaccgatcgtcaggggtcgcaaa
ggtgaatatcgcaaggaatttctggatctgcgcaagcgtggttttcaacgggtgaaagtt
gatggtgaaatttacgatatcgaagatattccggaactggacaagcagttaaaacatcat
attgacgttgtcgtcgaccgggtggtgattaacgaagacattcagggtcgccttgccgat
tccatcgaaacagcccttgaacttgcagacggattatttgtcgttgaagatgccgatagc
gcagagcgatttattttttccgctaaatttgcctgtcctgtatccggctttaccattgag
gaaatcgagccgcgtattttctcgtttaacaatccctacggggcctgcactgcctgtggc
ggtctcgggaccgagatgtattttgacccggatcagattgttcccgatgtcacattgaca
ttacgtggcggtgcgattgcaccctggtcgcgttcccagacacccgctccctattatatg
caaaccctggaagcacttggtaagcattatggatttaccaccacggagccctgggaggaa
atcgccgaggaatcgcgaaaagctattctttttggaacaggtgacgagaaaatccagatt
acctttgacgatggaatgcggacatataaaaccaacaaaccattcgaaggtgtgatcccc
aacatcgagcgccgctggcgcgaaactgacagcagctgggtgcgggaagacctggaaaaa
tatcaggacaagaccaattgcagtaaatgcagtgggcatcgcctgaaagaagaagctctc
gcaatcaaaatcgatgatcatcatattggagatgttgtcagcaagtctattttggatgcc
cgcaaatggtttgaagggttgagtaaggttctgtccccgaaagatctggccattggcgag
cgtgttttgaaagaaatcaacgaacgccttggctttcttgtggacgtgggattggagtac
ctaaccctgtcccggggctccggcactttatccggcggagaaagtcagcgaattcgattg
gcttcacaaattgggtccggattgacaggcgtcctttatgtgctcgatgagccttcgatc
ggactgcatcagcgggacaatgcccgcctgttgaaaacgcttatcaatttgcgggatcaa
ggcaattccgtgatcgttgtggaacatgatgaagaagccatcatgaccgcggatcatgta
attgatatgggcccgcgcgccgggagccatggcggtaaacttattgcccaaggcacacca
aaagaagtgatggaagccgacggcagtgtcaccggaaaatatctttccggggagctggaa
gtaccgcttcctgcggtccgcaggaaaatacaagaatctcggcagttgaagatcatcggg
gcccgtcacaacaacctgaagcgcgtaaacgtgaatatcccgcttggcacctttacctgt
gtcaccggtgtttcaggcggtggcaaatcctctctcatcatcgaaacattgtataaagcc
attgccaagaagctcaataataaccgcaaccatcctggaccacatgaccgtattgaaggg
atcgagtggctggataaaattgttgatattgatcagtctcccattggccggacaccgcga
tcaaacccggcgacatataccggtgcctttacaccgatccgtgaatggtttgcgggtttg
ccggatgcgaaggcccgcggttataaatcaggacgtttttccttcaacgtaaaaggcgga
cgttgtgaggcctgtaagggagacggtgttatcaaaattgaaatgcatttccttcccgat
gtctatgtgcaatgcgacgtctgtaagggggatcgctataatcgtgaaaccctggaaata
aaattcaaggacaaatcaattacagatgttctgaacatgacggttgatgaagctgccgtg
ttcttcaaagcggttcccaatgttcgggaaaaatttgaaactttacagcaggttggcctt
ggttacatccatgtgggtcagcaggcgacgacactttctggtggtgaggcgcagcgtgtc
aaacttgccaaagagttatccagacgggcaacggggcgtactttgtatatcctcgatgaa
cccacaaccggattgcattttgaagacgtccgtaagttgatggaagtcctgcaggcattg
gtcaataccggcaacagtgttttagtgatcgaacataatctggaagttatcaaaacggct
gactgggttgtcgatatgggtccggacggcggggacgcaggcggatatcttgttgctgaa
ggaacgccggaagaggtagctaaggtcaaagaaagctacacgggccaatatttgaaaacc
atattggcaaaacgaccggccgtaaagcaagccccttcaaaatcatccaagtccagcaaa
accagggcggcataa
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