Sneathiella marina: NBZ79_13785
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Entry
NBZ79_13785 CDS
T08200
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
snea
Sneathiella marina
Pathway
snea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NBZ79_13785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snea03021
]
NBZ79_13785
03400 DNA repair and recombination proteins [BR:
snea03400
]
NBZ79_13785
Enzymes [BR:
snea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NBZ79_13785
Transcription machinery [BR:
snea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NBZ79_13785
DNA repair and recombination proteins [BR:
snea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NBZ79_13785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
HHH_XRCC3_RpoA
Sif
Motif
Other DBs
NCBI-ProteinID:
USG60244
UniProt:
A0ABY4W4L8
LinkDB
All DBs
Position
complement(2866950..2867996)
Genome browser
AA seq
348 aa
AA seq
DB search
MVGLQSYEVNAVIQQNWKDLIQANLSVEQGEQSDREATIVAEPLERGFGLTLGNALRRVL
LSSLQGAAITSIQIDNVLHEFSSIAGVREDVTDIVLNLKTLAIRSHAEGPQRMVLKASGP
CEVTAGMIDTGADIEIMDPDQVLMTLDDGATISMEMNVETGKGYVAGAANRPEDAPIGLI
PMDSLYSPVRKVSYKVEAAREGQVLDYDKLTLKVETNGTVTPEDSVAFAARILQEQFQLF
VNFDEPEEVVVKEEREEPEFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEM
LRTPNFGRKSLNEIKEVLAQMGLHLGMDVPNWPPENIEDMAKRLEEPF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcctgcaaagctatgaggtcaatgccgtgattcagcaaaactggaaagaccta
atccaggccaacctctccgtcgagcaaggagagcagagcgatcgggaagctacaatagtt
gccgagcctttggaaagagggttcggtttaacattgggtaatgcactgcgccgcgtatta
ttatcaagtctgcagggcgctgcaattacctcgatccaaatcgataatgtattgcacgag
ttttcatcaattgccggcgtccgtgaagacgtaacggacattgttttgaatttgaaaacc
cttgccattcgtagccatgcagaaggaccgcaacggatggttctgaaagcatccggcccc
tgtgaagttacagccggcatgattgatacgggtgccgatattgaaataatggatcctgat
caggttcttatgaccctggacgatggtgcaacgatctcaatggaaatgaatgttgagacg
ggtaagggatatgttgccggtgcggcaaaccgtcctgaagatgcgcccatcggtcttatt
ccaatggatagcttatacagccccgtccggaaagtttcctacaaggttgaagctgcccgt
gaaggccaggttctggactatgataagttgacattgaaagtcgaaacgaacggaactgtt
acaccggaagattcggtcgcatttgccgcgcgcattttgcaggagcaattccagctgttc
gtcaattttgacgagcctgaagaggttgtcgtcaaggaagagcgagaagagccggaattt
aaccggaatcttcttcgtaaggttgacgaactcgagctttctgttcggtctgcaaactgc
ttgaagaacgacaatattgtttatattggcgatctcattcagaaaacagaagcagaaatg
ctgcggacaccgaatttcggccgtaagagcttgaacgaaatcaaggaagtattggcccag
atgggtctgcatcttggaatggatgtgccaaattggccgcctgagaatattgaagacatg
gcgaaacgcctggaagaacctttttag
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