Sneathiella marina: NBZ79_15290
Help
Entry
NBZ79_15290 CDS
T08200
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
snea
Sneathiella marina
Pathway
snea00630
Glyoxylate and dicarboxylate metabolism
snea00680
Methane metabolism
snea01100
Metabolic pathways
snea01120
Microbial metabolism in diverse environments
snea01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NBZ79_15290 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
NBZ79_15290 (fdhF)
Enzymes [BR:
snea01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NBZ79_15290 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_9
Fer4_10
Fer2
Fer4_2
Fer4_6
Fer4_8
Fer4_22
Fer4_4
Fer4_16
Fer4_18
Fer4_15
Fer4_3
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
USG60529
LinkDB
All DBs
Position
3168231..3170990
Genome browser
AA seq
919 aa
AA seq
DB search
MSDIISFILDGKTVSATTNDSIWDVAKREGTKIPHLCHTDRVGFEADGNCRACMVEIEGE
RVLAASCIRTPTEGMVVNTATDRPTKARKMVMELLIADQPDRAATYDTDSHFWQMADQQQ
IKDSRFDARDMPGDDLSHPAMAVNLDACINCNLCVRACRDVQVNDVIGMAGRGVGSKIVF
DFDDPMGESSCVGCGECVQACPTGALLEKTVVGDTRIDREVHSVCPFCGVGCQLTFKIRD
DKILYAEGRDGPANEERLCIKGRFGFDYIHNPERLTTPLIRKEGIAKDDVATLDPANPLT
HFREASWEEALELAANGLIQVRETKGGNALAGFGSAKGSNEEAYLFQKLVRTGFGTNNVD
HCTRLCHASSVAALLETVGSGAVSAPFNEAENAEVIMVIGSNPTINHPVAATFFKNAVKK
GAKLIIIDPRGQSLSRHATYMLQEKPGTDVALLNSMMHVIVKEGLTDKDYIKNHTENFAE
LKAHLDGFSPEAMEKVTGIDPDLIRDVAREFATAKSSIIFWGMGISQHVHGTDNSRCLIS
LSLMTGQVGRPGTGLHPLRGQNNVQGASDVALIPMFLPDYQSVEDPVIRERFEKFWNADI
DPNKGLTVVEITEAVHKGTINGMYIMGENPAMSDPNVSHAREALSLLDHLVVQDLFLTET
AAYADVVLPASAWPEKDGTVTNTNRQVQMGRAAVPMPGDARQDLWIIQEMAKRLGLDWNY
GHVKEVFTEMTQVMGSIKGISWDRLENADAVIYPCESPEDPGQPLIFTENFPTKNGLGKF
VPASLISPDETPDQDFPTVLTTGRLLEHWHTGSMTRRSEVLDAVEPEPIVHMAPGMMENL
EILPGDLVTVSSRRGQLDIKVRADGGVQNGMIFIPFCYAEAAANLLTNDALDPFGKIAEV
KFCAVKVEKKKMPELAGDL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcatctcctttatactggacggcaagactgtctccgcgactacaaacgac
tctatctgggacgtggcgaagcgcgaagggacaaaaatcccccatctctgccacacggac
cgtgttggttttgaggcggacggcaactgccgggcctgcatggtggaaattgagggcgaa
cgtgttcttgcggccagctgtatccggacaccgaccgaaggtatggtggtcaatacggcc
accgaccggccgaccaaggcccggaaaatggtgatggaactgctgatcgccgatcagcct
gatcgcgccgctacctatgatacggacagtcatttctggcaaatggctgatcagcagcag
atcaaggatagccggtttgacgcccgagacatgccaggcgatgatctatcccatccggcc
atggcggttaatctggatgcctgtatcaactgcaacctctgcgtccgggcctgtcgtgac
gtgcaggtcaatgacgtgatcggcatggctggccgcggtgtgggctcgaagattgtcttt
gattttgacgatcccatgggggagagttcctgcgttggctgcggcgaatgtgtgcaagcc
tgcccgacaggggcgttgctggagaaaaccgttgttggagatacgcggatcgaccgcgag
gttcacagcgtctgcccgttctgcggtgtgggctgtcagctgacctttaaaatccgcgat
gacaagatcctgtatgcggaaggccgggacggtccggccaatgaggaacggctctgtatc
aagggccgtttcggcttcgattatatccataatccggagcgcctgaccacaccccttata
cgtaaagaagggatcgccaaggatgacgtggccacgctggatccagccaacccactcacc
catttccgcgaagccagctgggaagaagcccttgaactcgccgcgaatggcttaatccag
gtccgcgagacaaaaggcggcaatgcccttgcaggatttggctcggccaagggctctaac
gaagaggcctatctcttccagaaactggtgcgtacgggctttggcaccaacaatgtcgat
cactgtacgcggctatgccatgcctcgtccgtggcggccttgctggaaacggtgggttcg
ggagcggtctcggcgccgtttaatgaagcggaaaatgccgaggtgatcatggtcatcggc
tccaacccgaccatcaatcatcccgtagcagcgaccttcttcaaaaatgcggttaaaaag
ggcgccaagctgatcatcatcgacccgcgcggtcaatcgctgtcccgtcatgcaacctat
atgctgcaggaaaagcccggaaccgacgtggccctgctcaactccatgatgcatgtgatt
gtcaaagaaggtcttacggataaagactacatcaagaaccataccgagaattttgccgag
ctgaaagctcatctggacgggttcagccccgaagccatggagaaagtgaccggtatcgat
ccggatctgatccgcgacgtggcgcgggaattcgccacggccaaatcctccatcatattc
tggggcatgggcatcagccagcatgtgcatggcacggacaattcccgctgcctgatcagc
ctgtccctgatgaccggacaggtcgggcgccccggaaccggcctgcatcccctgcgcggt
cagaataacgtgcaaggggcttccgatgtggccctgatcccgatgttcctgcccgattac
cagtcagttgaggatcccgtcattcgggaacggttcgagaaattctggaatgccgatatt
gatcccaataaaggcctcacagtcgttgagataaccgaagccgtgcataaagggacaatc
aatggcatgtacatcatgggtgaaaacccggccatgtcggaccccaatgtcagccatgcc
cgcgaagccttgtctctgctggatcatctggtggtgcaggatctgttcctgacggaaacc
gcggcctatgcggatgtggtgctgccagcttctgcctggccggaaaaagatggcactgtt
acgaataccaaccggcaggtacaaatgggacgcgccgctgttcccatgcccggcgacgcc
cgtcaggacctctggatcattcaggaaatggcaaagcgtctcgggcttgactggaactac
ggtcatgtcaaagaggtgtttacggaaatgacccaggtaatgggaagcatcaagggcatc
agctgggatcggctggaaaatgctgatgcggttatctacccttgcgaaagccctgaagat
cccgggcaaccgctgatctttacagaaaattttccaacgaagaatggccttggcaaattt
gttccagccagcctgatctcaccggatgaaacaccggatcaggattttccgacagttctc
acgacgggacgcctgctggagcattggcataccggctccatgacccgccgctccgaggtt
ctggatgcggttgagccggagcccattgtccatatggcaccgggcatgatggaaaatctt
gagatcctgcccggtgacctggttaccgtaagttcgcgtcgtggccagctcgatatcaaa
gtccgcgccgatggcggtgtgcagaacggcatgattttcatccccttctgctacgctgag
gctgcggcaaaccttctgaccaatgacgcgctcgaccctttcggaaaaattgccgaggtc
aaattctgcgccgtaaaggtcgagaagaaaaaaatgccggaattggcaggagatctctaa
DBGET
integrated database retrieval system
