Sneathiella marina: NBZ79_16900
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Entry
NBZ79_16900 CDS
T08200
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
snea
Sneathiella marina
Pathway
snea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NBZ79_16900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snea02000
]
NBZ79_16900
Enzymes [BR:
snea01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NBZ79_16900
Transporters [BR:
snea02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NBZ79_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Cytidylate_kin
AAA_29
ABC_ATPase
AAA_15
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
USG60838
LinkDB
All DBs
Position
complement(3488583..3490385)
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AA seq
600 aa
AA seq
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MTEATREKIDNSTVTVIYGRLLKEYVAPYKGRVILAMLFMMVSAATAAATAFVMKPIVDE
VFFEQNPIYIYYTTAAVAVIFALRGFSAYGQTVLMDWVGTRVVSDIQLALFKKIVSADLA
WFHSNPTGNLISRFVFETNQLKAAATQTLVALTKDSLTAVFLIASLFYYDWRMALVILIA
LPPGALAIRQLVKRSRKAFHKVMEQTADFSIFLDEHFQGIRVVKAYGREKEAEQRGREVI
DERFRYQFKALRIQASSSPIVETLSGLIIAGVIFYGASNVVDGHTTPGTFFAFITAVMLT
YQPVKSVAKIFPQMQNGMVAAHRIFDLLDIVYKVVDKPDAVPLEFHKGKIEFEGVSFSYN
ENEPVLKNISLQLNAGKRIALVGPSGGGKSTILNLIPRFYNVNDGRILLDGQDVRDVTMA
SVRDKIALVSQDVFLFDASIKANIAYGRDEVSDEEILAAARSAAVHDFVSSLPDGYETLV
GSDGVRLSGGQKQRIAIARAMLKDAPILLLDEATSALDTDSERKIQIALKELMKGRTSLV
IAHRLSTILDADMINVIVAGEVVETGTHDELLVHGGVYADLYNNQFALDDSVTPFPQIRS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagcaacgcgtgagaaaattgacaattcaacagtgaccgtcatctatggccgg
ttactaaaggaatatgtagcaccgtacaaaggacgggtcatactcgctatgttgttcatg
atggtcagtgctgcaactgcagcggcaactgctttcgtcatgaagccaatagttgatgag
gtgttcttcgaacagaatcctatttacatttactatacaacagctgctgtagcagtcata
tttgcactgcgcggtttttcggcatatggccaaaccgtactgatggattgggtcggcaca
cgagttgtctccgatattcagttggcactctttaagaaaattgtatcggcggacctcgcc
tggtttcatagtaaccctacaggaaatttaatctcccgctttgtttttgaaaccaatcaa
ctcaaagcagcagcgacgcaaacgttagttgctttgacgaaagatagcttgacggcggtc
tttttgattgcgtcgctgttttattatgactggcgtatggcgcttgtcattctcattgcg
cttcctcccggagcattggcaatcagacagctggtaaaacgctcccgaaaagcgtttcac
aaagtgatggaacagaccgcagattttagtatttttctagacgagcattttcagggtatc
cgtgtcgttaaggcttatgggcgtgaaaaagaagcggagcaacgaggaagagaagtaatt
gatgaacgctttagataccaattcaaagcgcttcgtattcaagcatccagcagccccatt
gtggaaacactttcagggctgattattgcaggcgtgattttttatggtgcctcgaatgtt
gtcgacgggcatacaactccgggaacattctttgcttttataacagcggtaatgctgact
tatcagccagttaagagcgtcgccaagatatttcctcagatgcaaaatggtatggttgct
gcacaccgtatttttgatttgttggacatcgtatataaagttgttgataagccagatgct
gtcccgctggaattccataaaggaaaaattgaattcgagggcgtcagtttttcttataat
gagaatgaacctgttctaaagaatatttctctacaattgaatgccggtaagcgtattgct
ctggtgggtccctctggcgggggcaagtcgacaatattgaatctcatcccaagattttat
aacgttaacgacgggcgcatattgttggacgggcaggatgttcgggacgtgacgatggca
tcggtccgagacaaaattgctttggtaagccaggatgtttttctatttgatgcgtcaatt
aaggcaaatatcgcgtatggccgggacgaagttagtgacgaggaaatactagcggccgcg
cggtcagctgccgttcatgactttgtttcaagtttaccggacggctatgaaacgttagtt
ggcagtgatggtgtgagattgtccggcgggcagaaacagcgtattgccatcgccagagca
atgttgaaagatgctccgattttgcttttggatgaggctacatctgcgctggatacggat
tctgagagaaaaatccagattgcactgaaggaattgatgaaaggcagaacgtcgctggta
attgcgcatagactgtcgacaattttggatgctgacatgattaatgtcatcgttgcgggt
gaagtcgtggaaacaggtacacatgatgaattgttggtccatggcggtgtttacgccgat
ctgtacaataatcaatttgcgcttgacgattctgttacgccatttccgcaaattaggagc
tag
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