Sneathiella marina: NBZ79_17620
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Entry
NBZ79_17620 CDS
T08200
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
snea
Sneathiella marina
Pathway
snea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NBZ79_17620 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snea03019
]
NBZ79_17620 (groL)
03110 Chaperones and folding catalysts [BR:
snea03110
]
NBZ79_17620 (groL)
03029 Mitochondrial biogenesis [BR:
snea03029
]
NBZ79_17620 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snea04147
]
NBZ79_17620 (groL)
Enzymes [BR:
snea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NBZ79_17620 (groL)
Messenger RNA biogenesis [BR:
snea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NBZ79_17620 (groL)
Chaperones and folding catalysts [BR:
snea03110
]
Heat shock proteins
HSP60 / Chaperonin
NBZ79_17620 (groL)
Mitochondrial biogenesis [BR:
snea03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NBZ79_17620 (groL)
Exosome [BR:
snea04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NBZ79_17620 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NBZ79_17620 (groL)
Exosomal proteins of breast cancer cells
NBZ79_17620 (groL)
Exosomal proteins of colorectal cancer cells
NBZ79_17620 (groL)
Exosomal proteins of bladder cancer cells
NBZ79_17620 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
USG60979
LinkDB
All DBs
Position
complement(3656396..3658048)
Genome browser
AA seq
550 aa
AA seq
DB search
MAKEVKFNTDARNRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIE
LEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQSIVQEGLKAVAASMNPMDLKRGID
LAVGTAIQSIQSSAKPVAGQEEISQVGTISANGEAEIGSIISEAMQRVGNEGVITVEEAK
GLDTELDVVEGMQFDRGYLSPYFVTNAEKMVAEMDSPYILLHEKKLTNLQPMLPLLEAVV
QAGKPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQMI
SEEIGIKLENVGLDMLGTAKSVTITKEETTIVDGSGEKADIEGRCNQIRAQSEETTSDYD
REKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVAGGGVALLY
ASRALEGLEGENDDQNVGINIVKRALQAPCRQIAENAGSDGAVVVGKLLEQDSMTFGFNA
QSGEYTELTADGVVDPAKVVRAALEDAASVASLLITTEAMIADTPAKDGGGAPAMPDMGG
MGGGMGGMGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagtcaagttcaatacagacgcccgcaatcgtatgctgaaaggcgtcaat
attctggctgatgctgtaaaagttacgctcggtccaaaaggccgcaatgttgtaatcgac
aaatctttcggcgcaccgcgcatcacaaaagatggtgtaactgttgccaaggaaatcgaa
ctcgaagacaagtttgaaaatatgggcgcgcagatggttcgcgaagttgcgtctaaaacc
aacgatgttgccggtgacggaacaacgacagcgacagtgcttgcacagtcaatcgttcag
gaaggcctgaaagctgttgctgcttccatgaacccaatggaccttaagcgtggtatcgac
ctcgccgttggtacagcgatccaaagcattcaatcttctgcgaagccagttgctggccag
gaagaaatttctcaggtcggtacaatctctgcaaatggtgaagctgaaatcggcagcatc
atttccgaagccatgcagcgcgtcggcaacgaaggcgttatcacggttgaagaagctaaa
ggacttgatacagagcttgatgttgttgaaggcatgcagttcgatcgtggttacctgtct
ccttacttcgtgacaaatgcagagaaaatggttgccgaaatggacagcccatacattctg
ctacacgaaaagaaactgaccaacctgcagccaatgctgccattgctcgaagctgttgtt
caagctggtaagcctttgttgatcattgctgaagacattgaaggtgaagctcttgcaact
ctggttgtcaacaagctccgtggtggtcttaagattgctgctgttaaagcgcctggtttc
ggtgatcgtcgtaaagcaatgcttgaagacatcgcgatcctgaccggcggccagatgatt
tctgaagaaatcggcatcaaactggagaatgttggcctcgatatgcttggaacggcgaaa
tccgttacaatcacgaaagaagaaacaacaatcgtcgatggttccggtgaaaaagccgat
atcgaaggtcgttgcaaccagatccgcgcgcagtctgaagaaaccacttccgactatgac
cgggaaaaactgcaggaacgtcttgccaaacttgctggcggtgttgctgtcatcaaagtt
ggcggtgcaactgaagtagaagtgaaagaacgcaaagaccgtgttgatgatgcgttgcat
gcaacacgtgctgctgttgaagaaggtatcgttgccggtggtggtgttgctctgctttat
gcatctcgcgctctggaaggtcttgaaggcgaaaatgatgaccagaatgttggtatcaat
atcgtcaagcgggctcttcaggctccttgccgtcagatcgcagaaaatgcgggttccgac
ggcgcggttgttgttggtaaattgcttgaacaggacagcatgactttcggctttaatgca
cagtctggtgaatatacagaactgacagctgacggtgttgttgatccggccaaggttgta
cgggctgcattggaagatgcggcttcagtagccagcttgctgatcacaacagaagccatg
atcgcagacacacccgccaaagatggcggtggggcgcctgcaatgcctgatatgggcggc
atgggcggcggcatgggtggtatgggcttctaa
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