Sneathiella marina: NBZ79_18855
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Entry
NBZ79_18855 CDS
T08200
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snea
Sneathiella marina
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snea03016
]
NBZ79_18855 (truB)
Enzymes [BR:
snea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NBZ79_18855 (truB)
Transfer RNA biogenesis [BR:
snea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NBZ79_18855 (truB)
Prokaryotic type
NBZ79_18855 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
USG61221
UniProt:
A0ABY4W228
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All DBs
Position
3903437..3904333
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AA seq
298 aa
AA seq
DB search
MARKKRGIPVHGWLNIDKPVGMSSAQVVGAVKRITNAQKAGHAGTLDPFATGILPIALGE
ATKTVGYIVSDVKDYRFTARWGQATITDDIEGTVVEQSEIRPDLQLIQDTIPSFQGTIRQ
RPPAYSAIKIDGKRAYKLAREGVDVDLPERDVEIYNLSLVRLIDSDQATFEVTCGKGTYI
RSLARDFARKLGTVAHLTELRRTRVGPFLENDAISLDKLEKLWQCPAEFEALLPITTALD
DIPAVAITETQAVRFRHGNDVATPNLADGIVCAMDGNSPIGIAKVEDERLFPIRVFNI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaagaaacgcggcatccccgttcacggctggctcaatatagataagcctgtt
ggaatgagctcggctcaggtggtcggagcggtaaaacgaattaccaatgcacaaaaggca
ggccatgcaggcacgctggatccttttgcaacagggatccttcccatagctttgggggaa
gcgacgaaaaccgtcggctatatcgttagtgacgttaaagattaccggtttacggcgcgt
tggggacaagcgacaatcacagacgatatcgaaggtactgttgttgaacagtccgaaatt
cgtccggatttgcagcttatccaggacaccatcccgagctttcaaggaacgatccggcag
cgcccgccagcttattccgcaatcaagattgacggaaagcgggcgtataaacttgcccgc
gaaggtgttgatgtcgaccttcccgagcgagatgtggagatttacaatttgagtttggtt
cggttaatcgattctgatcaggcgaccttcgaagtcacgtgcggaaaaggaacgtatatt
cggtcgctggcccgtgattttgcccggaaattagggaccgtagctcacctgactgagctt
aggaggacacgagtcggaccttttttggaaaatgatgcgatttcgctggataagttagag
aagctgtggcagtgtcccgcagaatttgaggctctgcttccaattacgaccgcgctggac
gacatcccggcggtggccataacggaaacgcaagcagttcgctttcggcacggcaatgac
gtggcgaccccaaatttagcggacggaattgtctgtgcaatggatgggaatagtccaatt
ggcattgccaaagttgaagatgaaagattgttcccgatacgagtttttaacatttga
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