Serratia nematodiphila: NLX84_00240
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Entry
NLX84_00240 CDS
T08619
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
snem03012
]
NLX84_00240 (selB)
Translation factors [BR:
snem03012
]
Eukaryotic type
Elongation factors
NLX84_00240 (selB)
Prokaryotic type
NLX84_00240 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_1_3
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
UTO01586
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Position
53851..55692
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AA seq
613 aa
AA seq
DB search
MIIATAGHVDHGKTTLLQAISGINADRLPEEKRRGMTIDLGYAYWPQPDGRVLGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGVMAQTREHLAILRLSGRPALTVALTKADRVEAA
RVDEVRGQVRDELASQGWPDAPLFVTAAAAGEGIEALRAHLLALSPAEHALTRRFRLAVD
RAFSVKGAGLVVTGTALGGRVKVGDTLWLTGADAPVRVRGLHAQNQTVEQAQAGQRIALN
ISGDVDKERVARGDWLLAQRPHEAAERILVALETDRPIRHWQPLHLHHAASHITGRISLL
NDGLAELILDRPLWLAQNDRLVLRDIGARQTLGAARVLRLNAPKRGKRQPDYLAWLQALA
LAQDDAQALALELPHGALSLAAFAWARQLTDDGLDELLANRDLLIVGDRALAQDQVQQAE
SRLLQVLAEYHQQHADQLGLGRARLRRMALPQQPETLVFMMIDRLLRAGALRNTRGWLHL
PEHGLAFSAEEAPLWARIEPLFGDEPWWVRDLASELGEEESRVRALLRKAAQLGHVTAVV
VDRYYLSRRIDQFAALIRELDAERGGANAADFRDRLGVGRKLAIQVLEFFDRSGFTRRKG
NEHLLRDGGLFGN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgccaccgccggccatgtcgatcatggcaaaaccaccctgctgcaggcgatc
tccgggatcaacgcggatcgcctgccggaagaaaagcgccgcggcatgaccatcgatctg
ggttacgcctactggccgcagccggacggccgggtgctgggctttatcgacgtgcccggc
cacgagaaattcctcgccaatatgctggcgggcgtcggcggcatcgaccatgcgttgctg
gtggtggcctgcgacgacggcgtgatggcgcaaacccgcgagcatctggcgatcctgcgc
ctgagcgggcgcccggcgctgacggtggcgctgaccaaggccgaccgggtggaggcggcg
cgtgtcgatgaggtgcgcggtcaggtgcgcgacgagctggcgagccaggggtggcccgat
gcgccgctgttcgtgaccgcggcggcggcgggcgagggcatcgaggcgctgcgcgcgcat
ttgctggcgttgtcgcccgctgaacatgcgctgacgcgccgttttcgcctggcggtagac
cgcgcgttcagcgtcaaaggggcggggctggtggtgaccggcaccgcgctcggcggccgg
gtgaaggtgggggatacgctgtggctgaccggcgccgacgcgccggtgcgggtgcgcggc
ctgcatgcccagaatcagaccgtggagcaggcgcaggccgggcagcgcattgcgcttaac
atcagcggcgatgtcgataaagagcgggtcgcgcgcggcgattggctgctggcgcagcgt
ccgcacgaagcggcggaacgcattctggtggcgctggagacggatcggccgatccgccat
tggcagccgctgcatctgcaccatgccgccagccacatcaccgggcgcatttcgttgctg
aacgacgggctggcggaactgatcctcgatcgtccgctatggttggcgcagaacgatcgg
ctggtgctgcgcgatatcggcgcgcggcaaacgctgggcgcggctcgggtgctcaggctg
aatgcgcccaagcgcggcaagcgtcagccggactatctggcatggctgcaggccctggcg
ctggcgcaagacgatgcgcaggcgctggcgcttgaattgccgcacggcgcgctgtcactg
gcagcgttcgcctgggcgcgtcaattgacggacgatggcctggacgagctgctggcgaac
cgcgatctgctgatcgtcggtgaccgggcgctggcgcaggatcaggtgcaacaggcggaa
agccgcctgctgcaggtgctggcggagtaccaccaacagcacgccgatcagttgggctta
gggcgcgcccgcctgcggcgcatggccctgcctcagcagccggaaacgctggtgtttatg
atgatcgatcggctgctgcgagccggcgcgctgcgcaatacgcgcggctggctgcacctg
ccggaacacggcctggcgttcagcgccgaagaggcgccgctgtgggcgcgcatcgaaccg
ctgttcggcgacgagccgtggtgggtgcgcgatctggcgagcgagctgggcgaagaggag
agccgggtgcgcgcgctgttgcgcaaggcggctcagctgggccatgtgacggcggtggtg
gtggatcgctactacctcagccgacgcatcgatcagttcgcggcgctgatccgcgagctg
gatgcggagcgcgggggcgccaacgccgccgatttccgcgatcggctcggcgtcgggcgc
aagctggcgatccaggtgctggagttcttcgatcgcagcggctttacccgccgcaagggc
aacgagcatctgctgcgcgacggcgggttgttcggcaactga
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