KEGG   Serratia nematodiphila: NLX84_00670
Entry
NLX84_00670       CDS       T08619                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
snem  Serratia nematodiphila
Pathway
snem00300  Lysine biosynthesis
snem00470  D-Amino acid metabolism
snem01100  Metabolic pathways
snem01110  Biosynthesis of secondary metabolites
snem01120  Microbial metabolism in diverse environments
snem01230  Biosynthesis of amino acids
Module
snem_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:snem00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NLX84_00670 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NLX84_00670 (dapF)
Enzymes [BR:snem01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NLX84_00670 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: UTO01663
LinkDB
Position
152110..152934
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgaactggattttcactac
cgaatttttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgttgcttc
gcgcgtttcgtgcggctgaaagggctgaccaacaagcgcgatatccgcgtcagcacccaa
accgggcgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggtgag
ccgaatttcgacccgcaggcggtgccgttccgcgccgccaaggctgaaaagacctacatc
atgcgcgcggcggaacataccgtgttgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggacgacgtaaaaaccgccaaggtggagctgctcgggccggtgctggaa
gggcatgaacgcttcccggaacgggccaacatcggctttatgcaggtggtcagccgcgat
catatcaagctgcgcgtttatgagcgcggcgccggtgagacgcaggcctgcggcagcggc
gcctgtgcggcggtggcggtggggatccaacaggaattgctgtcagaagaagtgcatgta
gagctgccgggcggcagcctgcatattcgctggaaagggccgggcaacccgctgtttatg
accggtccggcaacccatgtctatgacggatttattcatctatga

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