Serratia nematodiphila: NLX84_00840
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Entry
NLX84_00840 CDS
T08619
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snem03021
]
NLX84_00840 (rpoH)
Transcription machinery [BR:
snem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLX84_00840 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UTO01696
LinkDB
All DBs
Position
187265..188122
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AA seq
285 aa
AA seq
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MTKEMQTLALVPQGSLEAYIRAANAYPMLTAEEERELAERLHYQGDLDAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPDDEARDGQSMAPVLYLQDKSSDFAEGIEEDNWESNAADKLAYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagccttagtaccccaaggtagcttggaagcctatatc
cgggcagccaacgcctatccgatgctgacggcagaggaagagcgggagctggctgaacgg
ctgcattatcagggcgatctggatgccgctaagcagctcatcctgtctcacctgcgcttt
gtcgctcatattgcccgcaactattcaggctatggtctgccgcaggcggatctgattcag
gaaggcaatatcggcctgatgaaagccgttcgccgcttcaaccctgaagtcggcgtgcgt
ctggtttcctttgcggtgcattggattaaggcggaaatccacgagtacgtattgcgcaac
tggcgcatcgtgaaagtggcgaccaccaaagcgcagcgcaagctgttctttaacctgcgc
aaaaccaaacagcgtttgggctggttcaaccaggacgaagtggaactggtggcccgtgag
ctgggcgtaaccagcaaagacgtgcgcgagatggaatcgcgcatggcggcgcaggacatg
acgttcgatccgactccggacgacgaggcccgcgacggccagtcgatggcgccggtgctg
tacctgcaggacaagagctcggacttcgccgaaggcatcgaggaagataactgggaaagc
aacgccgcagacaaactggcctatgcgctggaaggtctggacgagcgcagccagcatatc
atccgcgcccgttggctggacgacgacaacaagtcgacgctgcaggagctggccgatcag
tacggcgtttccgccgaacgcgtgcgccagctggaaaagaacgccatgaagaaactgaaa
atggcgatcgaagcctga
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