Serratia nematodiphila: NLX84_01325
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Entry
NLX84_01325 CDS
T08619
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_01325
Transporters [BR:
snem02000
]
Other transporters
Pores ion channels [TC:
1
]
NLX84_01325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
UTO01774
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Position
295624..297717
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AA seq
697 aa
AA seq
DB search
MGKHFAAQRHESVGNGEKAGLRAIGAFSSVFLGVCSLAIGNVNAAETKSNETYQDAETLL
VTGEKIKRSIFDTGSSVQVFDSNRIASMPDAVQIPDLLRMTPNVVDLGIGNELPTVRGID
GSGPNVGANAFLSGTRPRLNLSLDGRSLTYNEQTFGPQSLWDLDRVEVFLGPQSYIQGRN
AIAGAIVMASKDPTFEWESAFKGGAGNQHSSQLAAMASGPLVEDQLAFRVSVDRQRRRSE
ADLPAYAPVGDPREVEATTARAKLLFNPAGLRDLTTKLTFNHFGSTAPQNESLNPQPHPT
NPRHDPRRAVFKSNMNSTIWDLAWEASDALTFENRVIYTDFNINRPTAYNIQYAEIDGQE
VHVEPVVRFGGADSRLHGLAGLRYFHGTQDEFVNIFGGATFKDKTDTHSAFAELTYALTP
QVDVTAASRLEREHRRRDGGSQAVRIDFDETYTVFLPKLDVAWKPTDTQTYGAKIARGYN
AGGGGITIGTPVVSYTYGSEYVWNYELYTRHHLKDANVVLTGNLFYNDYKDMQLPYSLGE
NSSVIRNADKVETYGAEIGATWQPRWDFELFGNLGLLKTDIKKFSGSGVEGHELARAPAY
TANMGAKYQFLKGWELSSNVAFTDSYYSQYDNDSRGRIGSYWTANAQLAYTFDYGRATLY
AKNLFDSDRREMIRSNDIYTATLQRGRLIGAAVELNF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcattttgcggctcaacggcatgaaagcgtaggaaacggggaaaaggcgggg
ttaagagccattggggcgttttcctcggtatttttaggcgtgtgttcactggcgatcggt
aacgtcaacgcggcggaaacgaagagcaacgaaacctaccaggacgcggaaacgctgctg
gtcaccggtgagaagatcaaacgttccattttcgacaccggctccagcgtgcaggtgttc
gacagcaaccgcatcgcctcgatgcccgacgcggtgcagatccccgatctgctgcgcatg
acccccaacgtggtggatctgggcatcggcaacgaactgccgaccgtgcgcggtatcgac
ggttccggcccgaacgtcggggccaatgctttcctcagcggcacccgcccgcgcctcaat
ctgtcgttggacggccgttcgctgacctataacgaacagacgttcggcccgcagtcgctg
tgggatctggatcgcgtcgaagtgttcctcggcccgcaaagctacatccaggggcgcaac
gccatcgccggcgccatcgtcatggccagtaaagacccgaccttcgaatgggaaagcgcc
ttcaagggcggagccggcaaccagcactcgtcacagttggccgccatggcgtctggcccg
ctggtggaggatcagctggcgttccgcgtcagcgtcgatcgccagcgccgccgcagcgag
gctgacctgccggcctatgcgccagtgggcgatccgcgtgaagtggaagccaccaccgcc
cgcgccaagctgttgttcaatccggccggcctgcgcgatctgaccactaagctgaccttt
aaccacttcggcagcaccgcaccgcaaaacgaaagcctcaacccgcagccgcatccgacc
aatccgcgtcacgatccgcgccgcgccgtgttcaaaagcaacatgaacagcactatctgg
gatctggcctgggaggcctccgatgcgctgacgtttgaaaaccgcgttatctacaccgat
ttcaacatcaaccgtccgaccgcttacaacatccaatacgccgagatcgacggccaggaa
gttcacgtggagccggtggtgcgcttcggtggcgcggacagccgcctgcacgggctggcg
gggctgcgttatttccacggcacgcaggatgagttcgtcaacattttcggcggcgcgacc
ttcaaggataaaaccgatacccattcggcgttcgccgagctgacctatgcgctgacgccg
caggtggacgtgaccgccgccagccgtctggaacgcgaacaccgtcgccgcgacggcggc
agccaggcggtgcgcatcgacttcgatgaaacctacaccgtgttcctgccgaagctggac
gtggcctggaaaccgacggatacccaaacctacggcgccaagatcgcccgcggttataac
gccggcggtggcggcatcacgattggcacgccggtggtcagttacacctacggttccgag
tatgtctggaactacgagctgtacacccgtcatcacctgaaagacgccaacgtggtgctg
acgggtaaccttttctacaacgattacaaagatatgcagttgccgtactcgctgggtgag
aactccagcgtgatccgcaacgccgacaaggtggaaacctacggcgcggaaatcggcgcc
acctggcagccgcgctgggacttcgagctgttcggcaacctcggcctgctgaaaaccgac
atcaaaaagttctcgggcagcggcgtggaagggcatgaactggcgcgtgcgccggcttac
accgccaacatgggggccaagtatcagttcctgaaagggtgggagctgagcagcaacgtg
gcgttcaccgactcctactattcgcaatacgacaacgactcgcgcgggcgcatcggctcc
tattggacggccaacgcccagctggcttacaccttcgactacggccgcgccacgctgtat
gcgaagaatctgtttgactccgaccgccgcgagatgatccgaagcaatgacatctacacg
gcgacgctccagcgcggccgcctgatcggcgcggcggttgagctgaatttctaa
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