Serratia nematodiphila: NLX84_02180
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Entry
NLX84_02180 CDS
T08619
Symbol
treR
Name
(GenBank) trehalose operon repressor TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_02180 (treR)
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NLX84_02180 (treR)
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Ortholog
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GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_IclR
HTH_31
HTH_23
Peripla_BP_4
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
MarR
HTH_Crp_2
HHH
CENP-B_N
TrmB
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
UTO01929
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Position
complement(469255..470202)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGCVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGFDPIVMESQFETRLVQEHLHVLRQRNVD
GVILFGFTGLTAAMLKPWQEKMVVMVREYDGFSSVCYDDAGAVNLLMDRLYRQGHRHIGY
LGVQLSDATTGQRRYQAYLDACERLTLTPRATLGELSYQSGFQHAAEVIDAHTSALICAS
DSIALGAIKYLQQQPARAIQVCAIGNTPLLSFLFPDTLSVEFGYGSAGLLAAQQLLAQLS
GEQGIRRLVVPSKLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcacgcctgagcggcgtaggcaaatccacc
gtctcacgcgtgttgaacaatgaaggctgcgtgagcccgcaaacccgtgaacgggtggaa
gcggtgatccgtcagcaagggtttaccccctccaagtcggcgcgcgccatgcgcggccag
agcgacaaagtggtgggcatcatcgtttcccgtctcgattcgccgtcggagaaccaggcg
gtgcgcaccatgctgccgctgctgtatcagcagggcttcgacccgatcgtgatggagagc
cagttcgaaacccgcctggtgcaggagcacctgcacgtgctgcgccagcgcaacgtcgac
ggggtgatcctgttcggcttcaccggcctgaccgcggcgatgctcaaaccatggcaggaa
aaaatggtggtgatggtgcgcgaatacgacggcttctcgtccgtctgctacgacgacgcc
ggcgcggtgaacctgttgatggatcgtctgtaccggcaggggcatcggcatatcggctat
ctgggggtgcagctcagcgacgccaccaccggccagcgccgctaccaggcctatctcgac
gcctgtgaacgcctcacgctcacgccgcgcgccacgctgggcgagctgagttaccagagc
ggtttccagcacgccgccgaagtgatcgatgcgcacaccagcgcgctgatctgcgcctcc
gacagcatcgccctcggcgcgatcaagtacctgcagcagcagccggcgcgcgccattcag
gtgtgcgccatcggcaacaccccgctgctcagcttcctgttccccgacactctgtcggtg
gagttcggctacggcagcgccggcctgctggccgcgcagcagctgctggcgcagctcagc
ggcgaacaggggatccgccgcctggtggtgcccagcaaactttcctga
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