KEGG   Serratia nematodiphila: NLX84_02415
Entry
NLX84_02415       CDS       T08619                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
snem  Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:snem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:snem02048]
    NLX84_02415
Enzymes [BR:snem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NLX84_02415
Prokaryotic defense system [BR:snem02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NLX84_02415
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C HSDR_N_2 SNF2-rel_dom T1R_D3-like DUF5614 NAD_binding_9
Other DBs
NCBI-ProteinID: UTO01968
LinkDB
Position
complement(533675..537088)
AA seq 1137 aa
MEQSLNFEMLRSQWPELAELAYMAERYVHSDPESCLVKLRNYTELMVRWLYRQERLPEGI
KANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIKAKDTYWLLKEAYLLGIWL
YVRYAHGNVDDCPKFTLPPLTPSSASSDKKHLEEAIQAQIESRDRELALQRALQQEQEKA
EQLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLLAADWNVGEELKNTDQVTQEHPV
KEQPTATGGGYADYVLWDEAHKPLAVVEAKKTSVNAEQGRIQARLYADWLEKEYGQRPVI
FYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQYLIQQRETRLPLNSVPHVKDNEGKAV
AGRLYQLETITRVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRVLFLCDR
KELRKQAANAFNQFTNEPLYVVGKSKKADRQNARIYIATYPGMMKIMDHFDVGYFDLIIA
DESHRSIYNVYGDLFKYFDALQIGLTATPIDMVSKTTFGLFGCEGRIPTANYSLEDAIAD
NNLVPYEVVTHTTEFLREGIKREKLSDEQIRELEEQGIDPNTLEFDGKALDEAIYNKDTN
RYILRNLMENGLKDRDGQLPGKTIIFARNHKHALLLNELFNDMYPQFAGRFCQVIDNYDP
RAEQLIDDFKGLDESTNKELTIAISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRG
TRLCSGLYGNDENGKPLDKQKFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVML
GAAAQRKFDKQAVDLVAHQLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQD
LLSVLAPLMQWLDVRGQSDAMRFDMDILAAQTARYTNPEELDVLWPVIVEKVERLPPHLA
QVQQQGQRINQLRDLGWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDAN
LIQTETRKTNIRSIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQAELDELAKLVLI
QNPNVDIRALKEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLL
KNHIRDYGTIEMRQLFEQPFTHIHNEGVTGVFPDIEQIVRLQKIVEELGVVTDAATV
NT seq 3414 nt   +upstreamnt  +downstreamnt
atggagcagtctctcaattttgaaatgttgcgcagccagtggccggaactggcggaactc
gcgtatatggcagaacgctatgttcactccgatccggaaagctgtttggtgaagctgcgc
aactacaccgaattgatggtgcgttggttatatcgtcaggaacggctgcctgaaggcatc
aaagcaaatctgtatgatttaatgaacgccgatgtcttcaccagcatgatgccggaagcc
atcatcatgaaaatggatgcactgcgtatccacggtaaccgcgccgcgcacggcggacgt
atcaaagctaaagatacttactggctgttaaaggaagcgtatttactgggaatttggctg
tatgttcgctacgcccacggtaatgttgatgactgccccaaatttactcttcctcctctg
acgccatcttctgcgagttccgataaaaaacacttggaagaagcaatacaggcgcaaatc
gaaagccgcgatcgtgaactggcgcttcaacgcgcattacaacaggagcaggaaaaggcc
gaacagctcacccagcgcctgaatgaagccagagcgcgtaaccagcatgttgccgatatc
ctctctattgatgaagcggaaacccgccgccgcctgattgactcccgcttgcttgctgct
gactggaatgtaggggaagagctaaaaaataccgatcaggttacgcaggaacaccctgtt
aaagaacagcctaccgcaaccggtggcggttatgcggattatgtcttgtgggatgaggcg
cataaaccgctggcggtggtggaagccaaaaaaaccagcgtcaatgccgagcaggggcga
attcaggcccgactgtatgccgactggctggaaaaagaatatggtcagcgcccggtcatc
ttctacaccaacggttatgatatctggctgtgggacgaccataaaactcatggttatcct
ccgcgtcgggtatttggcttctacagcaaggaaagcctgcaataccttattcagcagcgt
gaaactcgtctgccgctgaacagtgtgccgcacgttaaggataacgaaggtaaggccgtt
gccggacgtttgtatcagcttgaaaccatcacccgcgtcagcgaacggtttaccaacaag
taccgacaatcgttaattgttcaggcgacaggtacaggcaaaacccgcgtggcaattgcg
ctaagcaaactaatgattgatgcccgctgggtaaaacgtgtcctgtttctttgtgaccgc
aaagagctacgtaaacaggcggcgaatgccttcaatcagttcaccaatgagccgctgtat
gtggtcgggaaatcgaagaaagcagacaggcagaatgccaggatctacatcgccacctat
cccggcatgatgaaaatcatggaccatttcgatgtcggttatttcgatctgatcatcgcc
gatgaatcccatcgctctatctacaacgtctacggcgatctgtttaagtattttgatgcc
ctccagattggtctgacagccacgccgatcgatatggtgagcaaaaccacttttgggcta
tttggttgtgaaggacgtatccctaccgccaactacagcctggaagatgccatcgccgat
aacaacttagttccctatgaggttgtcacgcacaccacagaattcctgcgcgaaggcatc
aaacgggagaaattaagcgacgaacaaatccgcgagctggaagaacagggtatcgatcca
aatacgctggaatttgatggcaaggcgctggatgaggcgatctacaacaaagacaccaac
cgctatatcctgcgtaacctgatggaaaatggcttgaaagatcgggacggccagttgcca
ggtaaaaccatcatttttgcccgtaaccacaaacacgcgctgctgttgaatgaattgttc
aacgacatgtacccgcagtttgccggacgcttctgccaggtcatcgacaactacgatccc
cgcgccgagcaactgattgacgattttaaagggctggatgagagcaccaacaaagagctg
accatcgctatctctgttgacatgcttgataccggtattgatgttccggaaattgtgaat
ctggtctttgccaagccggtcaaatcaaaagtgaagttctggcagatgattggccgtggt
acgcgtctttgctcagggctgtacggcaacgatgaaaacggcaagccgctggataaacag
aaatttcgcatcttcgatcactggggcaacttcgagtatcacgagctgcataccgaagag
gccgaagtcacagcgacaaaatcgctggcgcaaaaacgcttcgaagcgtgggttatgctg
ggggctgctgcgcagcgtaagttcgataaacaggcggtggatttagtcgctcaccagctc
cgcgagcagatcaacgcgctggatgaaaagtcgattgctgtgcaggaaaagtggcagcaa
aaagcacagtacagcgatgaaaaagtgctgcgtcagctttcccctaaaacacagcaggat
ctgctatctgtcctggccccgctgatgcagtggctggacgtgcgtgggcaaagcgatgct
atgcgcttcgatatggatattctggcggcgcaaactgcccgttataccaacccggaagag
ctggatgtgctctggccggtcatcgtcgagaaagtggaacgtctgccgccgcatctggcg
caggtgcaacagcagggacagcggattaatcagcttcgtgatttaggctggtggaagcag
gccagtctggaagaactggaagatatccgcattcacctgcgcggcatcatgcacctgatg
gagaaagatgctacgccgaaatttggttcgatacaggtggatattaccgaagatgcgaac
ctgatccagacggaaacccgtaaaaccaatatccgctcgattgatttcaaactctatcgc
cagcaggttcagggagcgctggagccgctgttccagcaaaacccggtgctgaagaaaatc
cgcaacggcgagccggtcacgcaagccgagctggatgaactggcgaagctggtgctgatc
cagaatccgaacgttgatatccgggcactgaaagagttctatccgcaggcaacagctagc
ctggataaacttttgcgtaccatcatcgggatggacagcgacgcagtggaagtgcgcttt
gcccagttcgccgctgacaacagcctgaccagccagcaactgcgcttcctgtcactgctg
aaaaaccacatccgcgattacggcaccattgaaatgcggcagctctttgaacaaccgttt
acgcatatccacaacgaaggcgttaccggtgtgttcccggatatagagcagatcgtccgg
ttgcaaaagatagtcgaagagctgggtgttgtgaccgacgcagcgacggtataa

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