Serratia nematodiphila: NLX84_02565
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Entry
NLX84_02565 CDS
T08619
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_02565
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NLX84_02565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
UTO01996
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Position
complement(568697..569596)
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AA seq
299 aa
AA seq
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MKMSIKQLRAFLAVAHTLNFAQASERLNISQPALSLAIRGLEDALGGPLLLRTTRRVTLT
PEGETFFPMARQLLADWDNAEEAMRQRFTLQMGKVAIAAMPSFAGNPLPPILKAFRDRYA
GINVAVHDVINEQVFEMIREGRVEMGIAFEPEPSDTLHFTPLCRDRFLAVVPKDSALARK
AQVSWKELLTLDFITLQRPSAVRLLLEQALARSGRTLEVAFESHQLVTVGRMVANGLGAS
AVPALCERQMDELGAVCVPLIGPIIERRVGLIRLAQHQLSSAAQALATVIEREMAGSGG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcatcaaacagttacgcgcgtttttagcggtagctcacactctgaatttc
gcccaggccagcgagcggctgaatatttctcagccggcgctcagcctggcgatccgtggg
ctggaagacgcgctgggcgggccgctgctgctgcgcaccacccgccgggtgacgctgacg
ccggaaggagaaaccttcttcccgatggcgcgccagctgctggcggattgggacaacgcg
gaagaggcgatgcgtcagcgcttcaccctgcagatgggcaaggtggcgatcgctgccatg
ccgtcgttcgccggcaacccgctgccgccgatcctcaaggcgtttcgcgatcgttacgcc
ggcatcaacgtggcggtgcacgacgtcatcaacgagcaggtgtttgaaatgatccgcgaa
ggccgggtggagatgggcatcgccttcgagccggagccgagcgacaccctgcacttcacc
ccgctgtgccgcgatcgctttctggcggtggtgccgaaggattcggcgctggcgcgcaag
gcgcaggtgagctggaaggagctgctgacgctggatttcatcaccctgcagcggccatca
gcggtgcggctgctgctggagcaggcgctggcccgcagcgggcgaacgctggaggtggcg
tttgagagccaccagctggtgacggtcgggcgcatggtggccaacggcctcggcgccagc
gcggtgccggcgctgtgcgagcgacagatggatgagctgggggcggtgtgcgtgccgctg
atcggcccgattatcgaacggcgcgtgggcctgatccgcctggcgcagcaccaactctct
tccgccgcgcaggcgctggcgacggtaatcgaacgggagatggcgggaagtggcgggtaa
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