Serratia nematodiphila: NLX84_03240
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Entry
NLX84_03240 CDS
T08619
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
snem
Serratia nematodiphila
Pathway
snem00220
Arginine biosynthesis
snem00240
Pyrimidine metabolism
snem00250
Alanine, aspartate and glutamate metabolism
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01240
Biosynthesis of cofactors
Module
snem_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NLX84_03240 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NLX84_03240 (carB)
00220 Arginine biosynthesis
NLX84_03240 (carB)
Enzymes [BR:
snem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NLX84_03240 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
UTO02116
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All DBs
Position
707827..711051
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGSDRIWYSADAFRAGLSVDGVFNLTNVDRWFLVQIEELVRLEEQVAEAG
INGLNKEFLRTLKRKGFADARLAKLAGVAESEIRKLRHSYGLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPTNDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
VIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVTAIEQAVEKAAAIGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRRQVEKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLVEQGVTEEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSGMKKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQEMHARIGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatcctcggcgctggcccgatcgttatc
ggccaggcgtgtgagttcgactactcgggtgcccaggcgtgtaaagcgctgcgcgaagag
ggttaccgcgtcattctggtcaactccaacccggcgaccatcatgaccgacccagaaatg
gccgacgccacctacatcgagccgatccactgggaagtggtgcgcaagatcatcgaaaaa
gagcgcccggatgcggtgctgccgaccatgggcggccagacggcgctgaactgcgcgctg
gaactggagcgtcagggcgtgctggccgagttcggcgttaccatgatcggcgccaccgcc
gatgcgattgacaaggccgaagaccgtcgccgtttcgacgtggcgatgaagaaaatcggt
ttggataccgcgcgttccggcatcgcgcacaccatggaagaagcgctggcggtggccgct
gacgtcggtttcccgtgcatcatccgtccttcctttaccatgggcggcaccggcggcggc
atcgcctacaaccgcgaagagttcgaagagatctgcgaacgcggcctggatctgtcgccg
accaacgagctgctgatcgatgaatcgctgatcggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtctgctccatcgaaaacttcgacgccatg
ggcatccacaccggcgactcgatcaccgtcgcgccggcccagaccctgaccgacaaggaa
taccaaatcatgcgcaacgcctcgatggcggtgctgcgtgagatcggcgtcgaaaccggc
ggctccaacgtgcagttctcggtcaacccgaaaaccggccgcctgatcgttatcgaaatg
aacccgcgcgtgtcgcgctcttcggcgctggcgtcgaaagccaccggcttcccgatcgcc
aagatcgccgccaagctggcggtgggctacaccctcgatgagctgatgaacgacatcacc
ggcggccgcaccccggcgtcgttcgaaccgtccatcgactacgtcgtgaccaagatcccg
cgcttcaacttcgagaagttcgccggcgccaacgatcgcctgaccacccagatgaagtcg
gtcggcgaagtgatggccatcggccgcacccagcaggaatcgctgcaaaaagcgctgcgc
ggtctggaagtgggcgccaccggcttcgatccgaaagtgagcctggacgatccggaagcg
ctgaccaaaatccgccgcgagctgaaagacgccggttccgaccgcatctggtacagcgcc
gacgccttccgcgccggtttgtcggtagacggcgtgttcaacctgaccaacgtcgaccgt
tggttcctggtgcagattgaagagctggtgcgcctggaagagcaggtggccgaggcgggc
atcaacggcctgaacaaagagttcctgcgcactctgaagcgcaaaggcttcgccgatgcg
cgtctggccaagctggccggcgtcgccgagagcgaaattcgcaagctgcgccacagctac
ggtttgcatccggtgtataagcgcgtggatacctgcgcggcggaattcgccaccgacacc
gcctatatgtactccacctatgaagaagagtgcgagtccaacccgaccaacgaccggccg
aaagtgatggtgctgggcggcgggccgaaccgtatcggccagggcatcgagtttgactac
tgctgcgtgcacgcttcgctggcgctgcgtgaagacggctacgagaccatcatggtcaac
tgtaacccggaaaccgtctccaccgactacgacacctcagaccgcctgtactttgagccg
gtaacgctggaagacgtgctggaaatcgtgcgcatcgagaagccgaagggcgtgatcgtg
cagtatggcggccagactccgctgaagctggcgcgcgagctggaagccgcaggcgtgccg
gttatcggcaccagtccggacgccatcgaccgcgccgaagaccgcgagcgcttccagcag
gcggtcaaccgtctgggcctgaagcaaccggccaacgccaccgtgaccgccatcgaacag
gcggtggagaaggcggcggccatcggctatccgctggtggtgcgtccttcctacgtgctg
ggcggccgggcgatggaaatcgtttacgacgaaaccgacctgcgccgctacttccagact
gcggtcagcgtatccaacgatgcgccggtgctgctggatcgcttcctggacgacgcggtg
gaagtggacgtcgatgctatctgcgacggcgagcgcgtgctgattggcggcatcatggag
cacatcgagcaggcgggcgtgcactccggcgactccgcgtgttcgctgccggcgtacacc
ctgagccaggaaattcaggacgtgatgcgtcgccaggtggagaaactggcgttcgagctg
caggtgcgcggcctgatgaacgtgcagttcgcggtgaaagacaacgaagtctacctgatt
gaagtcaacccgcgtgccgcgcgcaccgtgccgttcgtgtccaaagcgaccggcgtgccg
ctggccaaagtggccgcgcgcgtgatggcgggcaaaacgctggtcgagcagggcgtgacc
gaagagatcatcccgccgtactattcggtgaaagaagtggtgctgccgttcaacaaattc
ccgggcgtcgacccgattctggggccggaaatgcgctctaccggggaagtgatgggcgtg
ggccgcaccttcgcggaagccttctccaaagcgatgctgggcagcaactcgggcatgaag
aagcagggccgcgcgctgctgtcggtgcgcgaaggcgataaagcccgcgtggtcgatttg
gccgccagcctgctgaagcagggcttcgagctggacgccacccacggcaccgcggtggtg
ctgggcgaagcgggcatcaacccgcgcctggtcaacaaggtgcacgaagggcgtccgcac
attcaggaccgtatcaagaacggcgagtacacctacatcgtcaacaccacggcaggccgt
caggcgattgaggactccaagctgattcgccgcagcgcactgcagtacaaggtgcactac
gacaccacgctgaacggcggcttcgccaccgcgatggcgctgaaagcggatccgaccgag
caggtgacgtcggtacaggaaatgcacgcgcgcatcggcaagtaa
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