Serratia nematodiphila: NLX84_03410
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Entry
NLX84_03410 CDS
T08619
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snem
Serratia nematodiphila
Pathway
snem00061
Fatty acid biosynthesis
snem00071
Fatty acid degradation
snem01100
Metabolic pathways
snem01212
Fatty acid metabolism
snem02024
Quorum sensing
snem04146
Peroxisome
Module
snem_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NLX84_03410
00071 Fatty acid degradation
NLX84_03410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NLX84_03410
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLX84_03410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snem01004
]
NLX84_03410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snem04147
]
NLX84_03410
Enzymes [BR:
snem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NLX84_03410
Lipid biosynthesis proteins [BR:
snem01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NLX84_03410
Exosome [BR:
snem04147
]
Exosomal proteins
Exosomal proteins of breast milk
NLX84_03410
Exosomal proteins of breast cancer cells
NLX84_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UTO02149
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All DBs
Position
751285..753093
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AA seq
602 aa
AA seq
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MITNLLQYHLIHRIQHQITHRADRTAFRQWSPNGEFQLTWGAAAARIDRIAAGLLALGAE
VQERIGIFANNTMAWSLTDLAILHLRGVSVPLYSTNTPAQAAFVINDADIRILFVGEQAQ
LDAAIALRGVCPQLSHIIVFDEGTDLRGCEIAQHLGAFERAADPAAFVAQRRQRIEECDL
QDLFTLIYTSGTTGEPKGVMLDYRNLAAQLYLHDERLTVGEEDVSLSFLPLSHVFERAWS
FFVMHSGAQNVFLPNTDWVREAMGQVRPTLMCAVPRFYEKIFSAVHEKVARAPWLRRALF
HWAIVCGERKFLQERAGKPLGKLFELSHRWADKLVLSKLRGILGGRVRFLPAAGAKLDDN
VILFFQAMGVNIKYGYGMTETCATVSCWEEGHFRFGSIGKPLPEVEVRIGEENEIQVRGP
IVMRGYFNKPLETAATFTADGWLKTGDAGAIDEEGNLFITERLKDLMKTSGGKYIAPQML
EGTLAQDRFIEQVAIIADARKFVSALIVPCFESLEEYAKSVNLKYQDRLELLRNGEILAM
FEKRLREMQKELARFEQVKKFTLLPAAFSMELGELTPTLKLRRKVILQRYQREIDSMYQE
QA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaatctgctgcaataccatttgatccatcgtatacagcatcaaatcacccac
cgagccgatcgcacagcatttcgccaatggtcgcccaacggcgagtttcaactgacctgg
ggagcggcggctgcccgcattgatcgcattgccgccgggctgctggcgctgggcgccgaa
gtgcaagaacgtattggtatcttcgccaataacacgatggcctggtcgttgaccgatctc
gcgatcctgcacctgcgtggcgtcagcgtaccgctctattccaccaatacgccggcgcag
gcggccttcgtcatcaacgacgctgacattcgcatcctgttcgtcggcgagcaggcgcag
ctggatgccgccatcgcactgcgtggcgtctgcccacagctgagtcatatcatcgtgttc
gacgagggcaccgatctgcgcggctgcgagatcgcacaacacctgggcgccttcgagcgc
gctgccgatccggcggcttttgtcgctcaacgtcggcagcgcattgaagagtgcgacctg
caggatctctttaccctgatctatacctcgggcaccaccggcgaaccgaaaggggtaatg
ctggactaccgcaacctggcggcgcagctctacctgcatgatgagagactgacggtcggc
gaagaggatgtgtcgctcagtttcctgccgctgtcgcacgtgttcgagcgtgcctggagc
ttctttgtcatgcattccggcgcgcagaatgttttcctgccgaacaccgactgggtacgg
gaagcgatggggcaggtgcggccgacgttaatgtgcgcggtaccgcgtttctacgagaag
attttcagcgcggtgcatgaaaaagtggcgcgtgccccttggttgcgccgtgcgctgttc
cactgggcgatcgtctgcggggagcgcaagttcctgcaagagcgggccggcaaaccgttg
ggcaaactgttcgaactctctcaccgctgggccgacaagctggtattgagcaagctgcgc
ggcattctcggtggccgggtgcgtttcttgccggcagcgggtgccaagctggatgacaat
gtgatcctgtttttccaggcgatgggcgtcaacatcaagtacggctacggcatgaccgaa
acctgtgcgaccgtgtcctgctgggaagaggggcatttccgcttcggctctatcggtaaa
ccgctgccggaggtcgaggtgcgcatcggtgaagaaaatgaaattcaggtgcgcgggccg
atcgtgatgcgcggctatttcaacaaaccgttggaaaccgccgcgacctttaccgccgat
ggctggctgaaaaccggcgacgccggggcgatcgatgaagagggcaatctgttcatcacc
gagcgcctgaaagatttgatgaaaacctccggcggcaaatacatagcgccgcagatgctg
gaaggcacgctggcgcaggaccgctttatcgagcaggtggcaatcatcgccgatgcgcgc
aagttcgtttccgcgctgatcgtgccgtgctttgagtcgctggaagagtacgcgaagtca
gtcaacctgaaataccaggatcgcctggagctgctgcgcaacggtgagatcctcgcgatg
ttcgaaaagcgtctgcgcgagatgcaaaaggagctggcgcgtttcgagcaggtgaagaag
ttcacgctgctgccggcggctttttccatggagttgggggagctgacgcccacgctgaag
ctgcgccgcaaagtgatcctgcagcgctatcagcgcgaaatcgactcaatgtaccaggaa
caggcctga
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