Serratia nematodiphila: NLX84_04870
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Entry
NLX84_04870 CDS
T08619
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snem03400
]
NLX84_04870 (sbcC)
DNA repair and recombination proteins [BR:
snem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLX84_04870 (sbcC)
Archaeal homologous recombinant proteins
NLX84_04870 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
GTP_EFTU
TsaE
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTO02411
LinkDB
All DBs
Position
complement(1039099..1042350)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGIGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDALHQRASGIELLNDEQRQSLTEQLAALSAQEIALGEQTQR
QQQALSWLQQWQRLRQQQSEGQLRLDTAQREQAEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQQSAQLSPLQQTVEKARLAQQAHAEHMRQQQQLIDEQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAQQQTALEQLTVQRSQLTTQTAQHQQQLNALTQA
LAVQQQRQQALEAQTPLAPLRQRLSVLADLRPTRQQLFTLSSLSQQIVKRLEQQRQELNS
GQHELTQLEPQLELIRQRFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQTIAQDE
QQLAGQQQQWRQLSAPLAFDFTLADGEQLSAWLNGCDDEERRGQHALQQHEQAAQAVQQA
KDAFIALQTQQQQAQQQLALLEERFTLLQKAHADSLQQQQELHQRWQEGEKTLAERRAQR
LALFGEQQVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQAGLQQQHTQMQE
RLQQAQQQWQQALADSEFADETAFAAALLDDALRRELQQRKEQLQQRQVEAAALLTQATQ
TLEQHRQNRPEGLDEANADLDALTQSLAELAQQLKALQLRQGELRNQLASDAERRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggtctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatttgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccaagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgagttcgaggtcaagggcatcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaatctgcaggcgccgaaggtcgaactggcgcgccgcgaggac
ggcaagatcctggcggacaaagtgcgcgacaagctggagcttaccgccgccatcaccggg
ctggactttggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgcgttc
ctcaacgccgacgccaacgatcgcgccgagctgttggaagagctgaccggcaccgaaatc
tatgggcggttgtccgaacaggtgttcgagtcgcacaagcaggccaaaaccgacctggat
gcgttgcaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctggcggcgctgagcgcgcaggaaatcgctctcggcgaacaaacccagcgg
cagcaacaggcgctgagctggctgcaacaatggcaacgcctccggcaacagcaaagcgag
gggcaattgcggctggacaccgcccagcgcgagcaggcggaggccgccccgcagctgcag
cggctggcgctcagcgagccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcaacagcaggaa
cagcagtcggcgcagctgtcgccgctgcagcagacagtggaaaaagcccgtctggcgcag
caagcgcatgccgaacacatgcggcaacagcaacagttgatcgacgagcaggtcgccccg
ctcgaccatcaaatagcccaactgcagtcgacacaggccgaacgtagacaggccggcgat
gccgccgcgcagcaatgcgcccagcagcagaccgcgctggagcagctcaccgtccagcgc
agccaactgacgacgcagaccgcacagcatcagcagcagttgaacgcgctgacccaagcg
ctggccgttcaacaacagcggcagcaagcgctggaggcgcaaacgccgctggccccgctg
cgccagcgcctgagcgtcctggcggatctgcgcccgacgcgccagcagctgtttactcta
tcctctttatcgcagcaaatcgttaaacggctggaacaacagcggcaagagctaaacagc
ggtcaacatgaacttacccagttggaaccgcagctagaactcatccgtcagcgatttaag
cagcagaaagcccaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaggccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagaacaataccaagaggtaaaactgtcagaaaccgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcagttgcagcgtcagcagcaaaccattgcgcaggatgaa
caacagctggccggccaacagcagcagtggcggcagctcagcgcgccgctggcgttcgac
tttacgctggcggatggcgagcaactcagcgcctggctgaacggctgcgacgacgaagaa
cggcgcgggcaacacgcgctgcagcagcatgaacaggcggcgcaggcggtacaacaggcg
aaggatgcgttcatcgctctgcaaacgcagcagcagcaggcgcagcaacagctggcgttg
ctcgaagaacgctttacgctgctgcagaaagcccacgccgacagcctgcaacagcagcaa
gagctgcatcaacgctggcaagaaggcgagaagacccttgccgaacgacgcgcgcagcgg
ctggcgctgttcggcgaacagcaggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgtgaacaggccagtttgcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctggccggccagcaggccgggctgcaacagcaacacacccagatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgccgcgctgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcagctgcaacagcggcaagtggaggccgccgccctgctgacacaggcgacgcaa
acgctggagcagcaccggcagaaccgccctgaagggctggatgaagccaacgcggatctc
gacgcgctcacccaatcgctggccgagctggcgcagcagttgaaggcgctgcagctgcgc
cagggcgaactgcgcaaccagctggcaagcgacgccgaacgccgtctcaatcagcaggcg
ctgttcgagcagatcgcccgcagccagcaagactacgacgactggagctacctcaaccag
ctgatcggctcaaaagagggcgacaagtttcgccgcttcgctcaggggctgacgctcgat
catctggtgtatctggctaaccttcagctcggccggctgcacgggcgctacctgctgcag
cgcaagaccagcgacgcgctggagctgcaggtggtggacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggcgagagtttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggt
ttcggcacgctggacgccgaaaccctcgataccgcgctggacgcgctggacagtctgaac
gcctccggcaaaaccatcggcgtgatcagtcacgtcgaggcgatgaaagagcgtattccg
gtgcagatcaaagtgaaaaaggtcaacgggctcggcgtcagccggttggaggcgcacttc
aggctggaatga
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