Serratia nematodiphila: NLX84_05155
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Entry
NLX84_05155 CDS
T08619
Symbol
smdA
Name
(GenBank) multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
snem
Serratia nematodiphila
Pathway
snem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLX84_05155 (smdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_05155 (smdA)
Transporters [BR:
snem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NLX84_05155 (smdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
Rad17
AAA_18
TsaE
AAA_23
NB-ARC
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UTO02467
LinkDB
All DBs
Position
1104634..1106409
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AA seq
591 aa
AA seq
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MRLFAQIGWYFRREWRRYLGAVVLLIVIAILQLLPPKLVGIIVDGVTEKQMSTGVLLAWL
GLMIGTAIVVYLLRYVWRVLLFGASYQLAVELRENFYRQLSRQNPAFYLRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSLVMGVVVLVVMSTQISWQLTVLALIPMPLMAIAIKYYGD
QLHQRFKSAQAAFSSLNDQAQESMTSIRMIKAFGLEDHQSNRFADVAAQTGAKNMHVARV
DARFDPTIYIAIGASNLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYSRIRSLLDEAPAVQDGPQALPAGRGVLEVDIRAFHYPENPHPALHDVALTLK
PGQMLGLCGPTGAGKSTLLSLIQRQFDVDQGQIRYHGLPLPQVKLDDWRSRLSVVSQTPF
LFSDTVANNIALGHPGATQAQIEQAARLASVHEDILRLPQGYDTEVGERGVMLSGGQKQR
ISIARALLLDAEILILDDALSAVDGRTEHQILHNLRSWGQDRTVIISAHRLSALTEASEI
LVMQHGGVAQRGDPAALAAQPGWYRDMYRYQQLEAALDEAPENGEEALADE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgagattatttgcacaaatcggctggtacttccgccgggagtggcgccgctacctcggg
gcggtggtgctgctgatcgtcatcgccatcctgcaactgttgccgcctaagctggtcggc
atcatcgtggacggcgtcaccgaaaaacagatgtccaccggcgtgctgttggcctggctc
gggctgatgatcggcaccgcgatcgtcgtttatctgctgcgctatgtgtggcgggtgctg
ctgtttggcgcttcctaccagctggcggtcgaactgcgcgaaaacttttaccgccagctc
agccgacaaaacccggcgttctacctgcgtcatcgcaccggcgacctgatggcgcgcgcc
accaacgatgtggatcgcgtggtgttcgccgccggtgaaggcgtgctgacgttggtggat
tcgctggtgatgggggtggtggtgctggtggtgatgagcacccaaatcagctggcagctg
acggtgttggcgttaatcccgatgccgctgatggcgatcgccatcaaatattacggcgac
cagctgcaccagcgctttaaatcggcgcaggcggcgttttccagcctgaacgatcaggcg
caggaaagcatgaccagcatccgcatgatcaaggccttcgggctggaagatcaccaatcc
aaccgcttcgccgacgtcgcggcgcagaccggggccaagaacatgcacgtggcgcgggtg
gatgcgcgcttcgatccgaccatttatatcgccatcggcgcgtctaacctgttggccatc
ggcggcggcagttggatggtggtgaacggttcgctgacgctcgggcaactgaccagcttt
gtgatgtacctcggcctgatgatctggccaatgctggcgctggcctggatgttcaacatc
gtcgagcgcggcagcgcagcctacagccgcatccgcagcctgctcgacgaggcgccggcg
gtgcaggatggcccgcaggcgttgccggccgggcgcggcgtgctggaggtggatatccgc
gcgttccactacccggaaaacccgcatccggcgctgcacgatgtggcgctgacgctgaaa
ccagggcaaatgctggggctgtgcgggccgaccggggccggcaaatcgacgctgctgtcg
ctgatccagcgccagttcgacgtcgatcaagggcagatccgctatcacggcctgccgttg
ccgcaggtcaaactcgacgactggcgttcgcggctgtcggtggtgagccaaacgccgttc
ctgttctccgataccgtggcgaacaacatcgcactgggccatccgggggcgacgcaggcg
cagatcgaacaggcggcgcggttggccagcgtccatgaggacattctgcggctgccgcag
ggctatgacaccgaggtgggcgaacgcggcgtgatgctgtcgggcggacagaaacagcgc
atctccatcgcgcgcgcgctgctgctggatgcagagatcctgatcctcgacgatgcgcta
tcggcggtggatggccgtaccgaacaccagatcctgcacaacctgcgcagctgggggcaa
gatcgcacggtgatcatcagcgcacaccggctgtcggcattaaccgaggccagcgaaatc
ctggtgatgcagcatggcggcgtggcgcagcgcggcgatccggcggcgctggcggcgcag
ccgggctggtatcgcgatatgtaccgctatcagcagctggaagcggcgctggacgaagcg
ccggaaaacggtgaggaggcgttggccgatgaataa
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