Serratia nematodiphila: NLX84_06045
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Entry
NLX84_06045 CDS
T08619
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snem03400
]
NLX84_06045 (phrB)
Enzymes [BR:
snem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NLX84_06045 (phrB)
DNA repair and recombination proteins [BR:
snem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NLX84_06045 (phrB)
Prokaryotic type
NLX84_06045 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
Motif
Other DBs
NCBI-ProteinID:
UTO02633
LinkDB
All DBs
Position
1296620..1298050
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACSDPKARVLAVFIATPQQWRQHEMAPRQAALIHASLR
AVQQALAQKGIALHCHAGTDFAASIDWLAEYCRREQVDALFYNRQYELNERRRDVRLEQQ
LNGQVTCHGFDDSLLLPPGSVLTGGGEMYKVYTPFRNAFIQRLTESDVSCLPAPKIRADG
ALPAPEAPAAFDYPAADIGDDYPAGEEAALQRLRAFCREQVQDYLRQRDLPAIAGTSSLS
PYLAIGALSPRQCFNRLRAECPRLLEDRESGAFAWLNELIWREFYRHLLVAYPELCRHRP
FIAWTDKVRWCDDAAKLQAWQRGETGYPIVDAAMRQLNATGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNDIHYPHRWAEKQRRTLNYPLPIVDHKQARVETLAAFEAAKRGES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttgcgtaacgatctgcgtatcaccgacaacaaagcgctg
cacgccgcctgcagcgatcccaaagcccgggtgctggcggtgtttatcgccaccccgcag
cagtggcggcagcatgagatggcgccgcggcaggcggcgctgatccacgccagcctgcgg
gcggtacagcaggcgctggcgcaaaagggcattgcgctgcattgccatgccggcacggac
tttgccgcgtcgattgactggttggcggagtattgccggcgagagcaggtggacgcgctg
ttttacaaccgccagtacgaactgaatgaacggcgacgcgatgtgcggctggagcagcag
ttgaatggacaggtaacgtgccacggttttgatgacagcctgctgttgccgccgggcagc
gtgctaaccggcggcggcgagatgtacaaggtttatacgccgtttcgcaacgccttcatt
cagcgcctgactgagtccgacgtgagctgcctgccggcgccgaagatccgtgccgatggc
gcgttgcctgcgcctgaagcgccggcggcgttcgattatcccgcggcggacatcggggat
gactatcccgccggcgaggaggccgcgctgcagcggctgcgcgccttttgtcgtgagcaa
gtgcaggattaccttcgccagcgcgatctgcccgccatcgccggcaccagcagcctgtcg
ccctatctggcgattggcgcgctgtcgccgcgccagtgcttcaatcgcctgcgcgccgaa
tgcccgcggttgctggaagatcgcgagagcggcgctttcgcctggctgaacgagctgatt
tggcgcgagttctaccgccatctgctggtggcctatcccgagctgtgccgccatcggccg
tttatcgcctggacggacaaagtgcgctggtgcgatgacgcggcgaagctgcaggcctgg
cagcggggcgagaccggctatccgatcgtcgatgccgccatgcgccagctgaacgctacc
ggctggatgcacaaccggctgcgcatgatcagcgccagttttctggtgaaggatctgctg
attgactggcgggccggggagcgctacttcatgtcgcaactgctggacggggatctggcg
gccaataacggcggctggcagtgggcggcctccaccggcaccgacgccgcgccgtatttc
cgcatctttaacccgaccacacagggtgaacgttttgatccacaaggcactttcatccgt
aaatggttgccggaactggcggatgtgcccgacaatgacatccattacccccaccgctgg
gcggaaaagcagcgccgtacgctgaactacccgctgccgatcgtcgatcacaaacaagcc
cgcgtggagacgttggcggcgttcgaggcggcgaaacggggagagtcttga
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