Serratia nematodiphila: NLX84_06985
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Entry
NLX84_06985 CDS
T08619
Symbol
uca
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
snem
Serratia nematodiphila
Pathway
snem00220
Arginine biosynthesis
snem00791
Atrazine degradation
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
NLX84_06985 (uca)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
NLX84_06985 (uca)
Enzymes [BR:
snem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
NLX84_06985 (uca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
ATP-grasp
RimK
NQRA_N
RnfC_N
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
UTO02800
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All DBs
Position
1482340..1485960
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AA seq
1206 aa
AA seq
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MFTTVLIANRGEIACRAIRTLKRLGITSVAVYSDADRNAPHVTEADRAVALGGDKAADSY
LRIDKILAAAAATGAQAIYPGYGFLSESAEFAEACEAAGIAFIGPTAAQMREFGLKHRAR
ELAALAGVPMTPGTGLLESVEQAVAAAARIGYPVMLKSTAGGGGIGLTRCDDEAALRDAY
DSVKRLGEQFFRDAGAFIERFVDRARHVEVQIFGDGQGQVAALGERDCSLQRRNQKVVEE
TPAPHLPAATRQALHRAAVALGESVNYRSAGTVEFIYDAARDEFYFLEVNTRLQVEHPVT
EMVTGLDLIACMLQVAAGDALDWAALQRAPQGAAIEVRLYAEDPLKNFQPSPGVLTEVHF
PDDVRLDGWVATGSEVSAFYDPMIAKLIVHGADRAQALEKLRVALAATRLHGIATNLDYL
RQVIATPQFQRGDVWTRLLDDLRFQPHCLEVLQPGTYSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNHPAAAGLEFTLQGPTLRFHCDATIALTGASCPADLDGEAVAYWRPI
TVRAGQVLTLGRATHGCRTYLAVRNGFDVPVYLGSRSTFALGQFGGHAGRTLRVADMLAI
AQPALAASTTPVPIAAPQAMDDSLIPHYGDQWHIGVLYGPHGAPDFFTAESIEAFFATDW
QVHYNSNRLGVRLAGPKPEWAREDGGEAGLHPSNVHDCEYAIGAINFTGDFPVILTRDGP
SLGGFVCPVTIAKAELWKVGQVKPGDRIRFHPIGFRQAQSLEQAQLGSIEALAAVKAITL
PPPDLAPADSVSAAVLAALPAAEGRPAVAYRQAGDGYILMEYGDNVLDLALRLRIHLLMQ
SLREEAIPGVAELAPGVRSLQIRYDSRQISQADLLQRLLARERALGDVSRLKVPTRTVWL
PMAFEDSATLGAVDRYQQTVRASAPWLPNNVDFIQRINGLSRREQVRDILFDASYLILGL
GDVYLGAPCAVPLDPRHRLLSSKYNPARTHTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNKFLKNPQFTAGEPWLLRFFDQVRFYPVSEQELDEQREAFREGRMQVRIDESEFDF
AAYTRFLADNAGEIADFQHRQQQAFSAEVARWRSDDDEAEAQLLPPEEEDAIDGDLVSAD
LNGSVWKILVEPGQAVAAGQPLIVVEAMKMELAVTAPRAGIVKRISCRQGRPVGPGDALL
WLEKAV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaccgtactgatcgctaaccgcggcgaaattgcctgccgcgccattcgcacc
ctgaaacgcctgggcataaccagcgtggcggtctattcagacgccgaccgcaatgcgccg
cacgtcaccgaagccgacagggcggtggcgctcggcggcgacaaggccgcagacagctac
ctgcgcatcgacaagatccttgcggcggccgccgccaccggcgcgcaggcgatctacccc
ggctacggctttttgtccgagagcgccgagtttgccgaagcctgcgaggcggccggcatc
gcctttatcggcccgacggcggcgcagatgcgcgagttcggcctcaagcaccgggcgcgc
gagctggcggcgttggccggggtgccgatgacgccgggtaccggcttgctggagagcgtt
gagcaggcggtcgccgccgctgcgcgcatcggctacccggtgatgctgaaaagcaccgcc
ggcggtggcggcatcggcctgacgcgctgtgacgacgaggcggcgctgcgcgacgcgtac
gacagcgtcaaacggctgggggagcagttcttccgcgacgccggcgcctttatcgaacgc
ttcgtcgatcgggcgcgccacgtcgaggtgcagattttcggcgatggccaggggcaggtg
gcggcgctcggcgagcgcgactgttcgctgcagcgccgcaaccaaaaggtggtggaggaa
accccggcgccgcatctgccggcggcgacccgccaggcgctgcatcgggcggcggtggcg
ctgggcgagtcggtgaattaccgcagcgccggcacggtggagttcatttacgacgccgcg
cgcgacgagttttatttcctggaagtgaacacccgcttacaggtcgagcacccggttacc
gaaatggtcactggcctggatttgatcgcatgcatgctgcaggtggcggcgggcgacgcg
ctggattgggcggcgctgcaacgcgcgccgcagggcgcggcgatcgaggtgcgcctctac
gctgaagatccgctgaaaaacttccagcccagccccggtgtgctgaccgaggtgcatttc
cctgacgacgtgcgcctcgacggctgggtggcgaccggcagcgaagtttcggcgttttac
gacccgatgatcgccaagctgatcgtgcacggcgctgaccgggcgcaggcgctggaaaaa
ctgcgcgtggcgctggcggcgacccgtttgcacggcatcgccaccaacctcgactatctg
cggcaggtgatcgccacgccgcaatttcagcgcggcgacgtctggacgcgcctgctggac
gatttgcgtttccagccgcactgcctcgaagtgctgcaacccggcacctacagcagcgtg
caggattatcccggccgcctcggctattgggacatcggcgtgccgccgtccggcccgatg
gacgacttcgcgtttcggctggccaaccgcatcgtcggcaaccacccggcggcggccggg
ctggagtttaccctgcaggggccgacgctgcgctttcactgcgacgccaccatcgcgctg
acgggcgccagctgcccggccgatctggacggcgaggcggttgcgtattggcggccgatt
acggtgcgggccgggcaggtgctgacgctggggcgcgctacgcacggctgccgcacctat
ctggcggtgcgtaacggcttcgacgtgccggtgtacctcggcagccgctccaccttcgcg
ctcgggcagttcggcggccacgccgggcgcaccttgcgcgtggcggacatgctggcgatc
gcccaaccggcgctggcggccagcaccacgccggtgccgatcgccgcgccgcaggcgatg
gacgacagcctgatcccgcactacggcgatcaatggcacatcggcgtgctgtacgggccg
cacggcgcgccggactttttcaccgccgaatcgatagaggccttcttcgccaccgactgg
caggtgcattacaactccaaccgcctcggcgtgcgcctggcggggccgaagcccgagtgg
gcgcgggaggacggcggcgaagccggtttgcatccttccaacgtgcacgactgcgagtac
gccatcggcgcgatcaacttcaccggcgacttcccggtgatcctgacccgcgacgggccg
agcctcggcggcttcgtctgcccggtgaccattgccaaggccgaactgtggaaagtgggg
caggtgaagccgggcgaccgcatccggttccatccgatcggcttccggcaggcgcagtcg
ctggagcaggcgcagcttggcagcatcgaagcgctggcggcggtgaaggccatcaccctg
ccgccgccggatctggccccggcggacagcgtttccgccgcggtactggcagcgctgccg
gcggcggaggggcgcccggcggtggcgtatcgccaggcgggggacggttacatcctgatg
gagtacggtgacaacgtgctcgatctggcgctgcgcctgcgcattcatctgctgatgcag
tcgctgcgtgaggaggcgataccgggcgtggcggagctggcgccgggcgtgcgttcgctg
cagatccgctacgacagccggcagattagccaggccgacctgctgcagcgcctgctggcg
cgcgaacgggcgctgggggacgtcagccgcctgaaggtgccgacgcgcaccgtgtggctg
ccgatggcgttcgaggattcggccacgctgggggcggtggatcgctatcagcagacggtg
cgcgcctcggcgccctggctgccgaacaacgtcgatttcattcagcgcatcaacggcctg
agccgacgcgagcaggtgcgcgacattctgttcgacgccagctacctgatcctcgggctg
ggcgacgtctacctcggcgcgccctgcgcggtgccgctcgatccgcgccatcgcctgctg
agctccaaatacaacccggcgcgcacccataccgccgaagggacggtcggcatcggcggc
atgtacatgtgcatctacggcatggactcgccgggcggttaccagctggtggggcgcacg
ctgccgatctggaacaaattcctcaaaaacccgcagttcaccgccggtgagccctggctg
ctgcgctttttcgatcaggtgcgcttctacccggtcagcgagcaagagttggacgagcag
cgcgaagcgttccgcgaagggcgcatgcaggtgcgcatcgacgagagcgagttcgacttc
gccgcctacacccgtttcctggccgacaacgccggggagatcgccgatttccagcatcgc
cagcagcaggcgttcagcgccgaagtggcgcgctggcgcagcgatgacgacgaggccgag
gcgcagctgttgccgccggaggaagaagacgccatcgacggcgatctggtcagcgccgat
ctgaacggcagcgtgtggaagatcctggtggaaccggggcaggcggtggcggccgggcag
ccgctgatcgtggtcgaggcgatgaagatggagctggcggtcaccgcgccgcgcgccggg
atcgttaaacgcatcagctgccggcaggggcggccggtcgggccgggcgacgctctgctg
tggctggaaaaggcggtctga
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