Serratia nematodiphila: NLX84_08530
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Entry
NLX84_08530 CDS
T08619
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
snem
Serratia nematodiphila
Pathway
snem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLX84_08530 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_08530 (msbA)
Enzymes [BR:
snem01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NLX84_08530 (msbA)
Transporters [BR:
snem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NLX84_08530 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
nSTAND3
AAA_16
Zeta_toxin
AAA_22
MMR_HSR1
HUTI_composite_bact
AAA_29
APS_kinase
ABC_membrane_2
Cytidylate_kin
SLFN-g3_helicase
AAA_30
AAA_18
AAA_15
DUF87
AAA_25
G-alpha
AAA_5
AAA_23
AAA_24
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
UTO03079
LinkDB
All DBs
Position
1811563..1813311
Genome browser
AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPMITPFKTGLIVAAIALIMNAAGDTLMLSLLKPLLDDGFGKTD
SSVLVWMPLAVIALMLMRGVTSFVSSYCISWVSGMVVMQMRRRLFGHMMRMPVAFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFIMMFYYSWQLSVILIVLAPIVSI
AIRLVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQQVETERFNSVSNRMRQQ
GMKLVSASSISDPIIQLIASLALAFVLFAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDMEQEKDTGTREVKRAKGDIEFRNVTFYYPAKETPALR
DINLKIAEGKTVALVGRSGSGKSTIANLLTRFYDIQEGEILMDGHDLREYTLASLRNQVA
LVSQNVHLFNDTIANNIAYARESEYSREQIEKAAEMAYAMDFINKMENGLDTVIGENGVM
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQAALDELQKDRTSLVIAHRLS
TIEKADEILVVEDGRIVERGEHAELLERQGAYAQLHRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctctcgacctggcagacgttccgtcgactctggccgatgatc
actccttttaagaccgggctgattgtggccgccattgcgttgattatgaacgcagcgggg
gacacgctgatgctgtctctgcttaaaccgctattggacgatgggtttggaaaaaccgac
agcagcgtgctggtatggatgccgttggcggtgattgcgctgatgttgatgcgcggcgtg
accagttttgtttcaagctactgcatttcctgggtttccggcatggtggtgatgcaaatg
cgccgccgcctgtttggccacatgatgagaatgccggtggccttcttcgatcagcagtcc
accgggactttgctgtcgcgcattacctatgattccgagcaggtagcttcctcctcttcc
agcgcgctggtgaccgtggtgcgtgaaggagcctcgatcattggcctgttcatcatgatg
ttctactacagctggcagctgtcggtgatcctgatcgtgctggcaccgatcgtctccatc
gccattcgcctggtgtccaagcgttttcgcaacatcagcaagaacatgcagaacaccatg
gggcaggtaaccaccagcgccgagcagatgctgaaaggccataaagaagtgctgatcttc
ggcggccagcaggtggaaaccgagcgctttaactcggtgagcaaccgcatgcgccaacag
ggcatgaaactggtctccgcgtcttccatttccgatccgatcattcagctgatcgcttcg
ctggccctggcgttcgtgctgtttgccgccagcttcccaagcgtgatggaaaccctgacc
gccggcaccattaccgtggtgttctcgtcgatgatcgcgctgatgcgtccgctgaagtcg
ctgaccaacgtcaatgcccagttccagcgagggatggcggcctgtcagacgctgttctcc
attttggatatggaacaggaaaaagacaccggcacccgcgaagtgaagcgtgcgaaaggc
gatatcgaattccgcaacgtcaccttctactacccggccaaagaaacgccggcgctgcgt
gatatcaacctgaaaatcgccgaaggcaagaccgtcgcgttggtgggccgttccggttcg
ggtaaatccaccatcgccaacctgctgacgcgcttctacgatattcaggaaggcgaaatc
ctgatggatggccacgatctgcgtgaatataccctggcctcgctgcgcaatcaggtggcc
ctggtttcgcaaaacgtgcacctgttcaacgacaccatcgccaacaacatcgcctatgcg
cgtgagagcgaatacagccgcgagcagattgagaaagcggcggaaatggcgtacgcgatg
gacttcatcaacaagatggaaaacggtctggatacggtgatcggtgaaaacggcgtgatg
ctgtccggcggccaacgtcagcgcattgccatcgcgcgtgctttgctgcgcgattgcccg
atcctgatcctggatgaggcgacgtctgcgctggataccgaatccgagcgtgccattcag
gccgcgctggacgagttgcagaaagaccgcacttcactggtgatcgcgcaccgtctgtcg
accattgagaaggcggacgagatcctggtggtggaggacggccgcatcgtcgaacgcggt
gaacacgccgagttgcttgagcggcagggcgcctatgcgcagctgcaccgcatgcagttt
ggtcaataa
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